| Sequence 1: | NP_001034052.2 | Gene: | side-IV / 41657 | FlyBaseID: | FBgn0038156 | Length: | 1001 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_067470.1 | Gene: | Nectin3 / 58998 | MGIID: | 1930171 | Length: | 549 | Species: | Mus musculus |
| Alignment Length: | 528 | Identity: | 119/528 - (22%) |
|---|---|---|---|
| Similarity: | 184/528 - (34%) | Gaps: | 133/528 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 35 PFPSPNVWRQLLLPLLMLSGISQVC-----STYVEQDELMQNLDRPVPLTTVQGVLGRQAMLPCD 94
Fly 95 ISPQERDDAVYMVLWFR-EGDG-------EPIYNFDVRGRQFGQARLWSSPTAFGTRAHFSS-TT 150
Fly 151 HPAQLKIDNIRIEDEGVYRCR-VDFRNSPTRNLK--INLTVIVPPDRPVIYGQNRHEKAGNVESF 212
Fly 213 SEGNDIVLSCEVSGGRPRPNVTWYLDNTAIDESFEQRPDGKTINHLS----YPNVGRQHLNSRLM 273
Fly 274 CVASNTNLTPPNNRVVILDVNLKP-IAVHILTKDRFVSADRTYDVECKSSGSKPPALITW----- 332
Fly 333 -WKGSKQLKKLTKNFNEPDNQSLSILTFTPGREDDGKYLTCRAENQFIDGSAIEDKWRLIVHYQP 396
Fly 397 TTTLK--IGSSLNPDDIKEGDDAYFECIVLANPK-PYKMSWFHNGK-ELQHNISAGVILSDQSLV 457
Fly 458 LQSV---------SRASAGDYTCLAVNSEGKGPSNPVTLRIRYAPICATDHEELLGALKHETLPL 513
Fly 514 KCEVDSSP 521 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| side-IV | NP_001034052.2 | V-set | 79..188 | CDD:462230 | 28/120 (23%) |
| Ig | 210..281 | CDD:472250 | 14/74 (19%) | ||
| Ig strand B | 218..222 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 232..236 | CDD:409353 | 0/3 (0%) | ||
| Ig | <317..392 | CDD:472250 | 15/80 (19%) | ||
| Ig strand C | 329..333 | CDD:409353 | 1/9 (11%) | ||
| Ig strand E | 355..359 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 369..374 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 385..388 | CDD:409353 | 0/2 (0%) | ||
| Ig | 411..479 | CDD:472250 | 18/78 (23%) | ||
| Ig strand B | 417..421 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 431..435 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 454..458 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 468..473 | CDD:409353 | 2/4 (50%) | ||
| Ig | 494..576 | CDD:472250 | 6/28 (21%) | ||
| Ig strand B | 511..515 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 525..529 | CDD:409353 | |||
| Ig strand E | 551..555 | CDD:409353 | |||
| Ig strand F | 566..570 | CDD:409353 | |||
| fn3 | 593..675 | CDD:394996 | |||
| Nectin3 | NP_067470.1 | IgV_1_Nectin-3_like | 58..167 | CDD:409470 | 32/141 (23%) |
| FR1 | 58..81 | CDD:409470 | 9/39 (23%) | ||
| Ig strand A | 58..62 | CDD:409470 | 1/3 (33%) | ||
| Ig strand A' | 64..68 | CDD:409470 | 1/17 (6%) | ||
| Ig strand B | 73..81 | CDD:409470 | 3/10 (30%) | ||
| CDR1 | 82..86 | CDD:409470 | 0/3 (0%) | ||
| FR2 | 87..93 | CDD:409470 | 1/5 (20%) | ||
| Ig strand C | 88..93 | CDD:409470 | 1/4 (25%) | ||
| CDR2 | 94..113 | CDD:409470 | 4/18 (22%) | ||
| Ig strand C' | 103..108 | CDD:409470 | 0/4 (0%) | ||
| Ig strand C' | 110..114 | CDD:409470 | 1/3 (33%) | ||
| FR3 | 114..152 | CDD:409470 | 11/50 (22%) | ||
| Ig strand D | 121..125 | CDD:409470 | 1/3 (33%) | ||
| Ig strand E | 130..137 | CDD:409470 | 1/6 (17%) | ||
| Ig strand F | 144..152 | CDD:409470 | 3/7 (43%) | ||
| CDR3 | 153..156 | CDD:409470 | 2/5 (40%) | ||
| Ig strand G | 156..166 | CDD:409470 | 1/9 (11%) | ||
| FR4 | 157..167 | CDD:409470 | 2/9 (22%) | ||
| IgC1_2_Nectin-3-4_like | 170..265 | CDD:409501 | 22/104 (21%) | ||
| Ig strand A | 170..176 | CDD:409501 | 1/5 (20%) | ||
| Ig strand B | 189..196 | CDD:409501 | 1/6 (17%) | ||
| Ig strand C | 201..207 | CDD:409501 | 0/5 (0%) | ||
| Ig strand C' | 209..211 | CDD:409501 | 1/1 (100%) | ||
| Ig strand D | 213..220 | CDD:409501 | 1/6 (17%) | ||
| Ig strand E | 225..233 | CDD:409501 | 1/7 (14%) | ||
| Ig strand F | 243..250 | CDD:409501 | 3/6 (50%) | ||
| Ig strand G | 256..262 | CDD:409501 | 0/5 (0%) | ||
| Ig | 269..355 | CDD:472250 | 19/100 (19%) | ||
| Ig strand B | 287..291 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 301..305 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 320..325 | CDD:409353 | 1/4 (25%) | ||
| Ig strand F | 335..340 | CDD:409353 | 2/5 (40%) | ||
| Ig strand G | 350..353 | CDD:409353 | 1/2 (50%) | ||
| TM_EGFR-like | 402..432 | CDD:213052 | 7/29 (24%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||