DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-IV and hmcn2

DIOPT Version :9

Sequence 1:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_001920501.5 Gene:hmcn2 / 565032 ZFINID:ZDB-GENE-030131-9765 Length:4212 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IVNP_001034052.2 V-set 79..188 CDD:284989
IG_like 80..188 CDD:214653
Ig 210..281 CDD:299845
Ig 319..392 CDD:299845
IG_like 319..383 CDD:214653
IG_like 412..489 CDD:214653
IGc2 413..478 CDD:197706
Ig_3 509..572 CDD:290638
fn3 593..675 CDD:278470
hmcn2XP_001920501.5 VWA_2 38..208 CDD:290253
IG 441..512 CDD:214652
Ig 441..502 CDD:299845
I-set 516..603 CDD:254352
Ig 533..600 CDD:143165
IG 613..691 CDD:214652
Ig 624..690 CDD:143165
IG 710..784 CDD:214652
Ig 714..781 CDD:143165
IG 794..879 CDD:214652
Ig 794..879 CDD:299845
I-set 885..972 CDD:254352
Ig 904..972 CDD:299845
IG_like 982..1063 CDD:214653
IGc2 989..1053 CDD:197706
IG_like 1083..1159 CDD:214653
Ig 1089..1156 CDD:143165
I-set 1163..1241 CDD:254352
IGc2 1176..1231 CDD:197706
Ig 1244..1327 CDD:299845
IG_like 1258..1335 CDD:214653
Ig 1338..1430 CDD:299845
I-set 1344..1428 CDD:254352
IG_like 1441..1523 CDD:214653
IGc2 1448..1513 CDD:197706
IG_like 1536..1616 CDD:214653
IGc2 1545..1606 CDD:197706
IG_like 1638..1714 CDD:214653
Ig 1644..1711 CDD:143165
IG_like 1753..1830 CDD:214653
Ig 1760..1822 CDD:143165
I-set 1834..1918 CDD:254352
Ig 1851..1925 CDD:299845
IG_like 1937..2017 CDD:214653
IGc2 1943..2007 CDD:197706
IG_like 2031..2110 CDD:214653
IGc2 2039..2100 CDD:197706
I-set 2114..2202 CDD:254352
IGc2 2129..2192 CDD:197706
IG 2214..2295 CDD:214652
IGc2 2222..2287 CDD:197706
I-set 2307..2391 CDD:254352
IGc2 2321..2381 CDD:197706
I-set 2400..2484 CDD:254352
IGc2 2410..2474 CDD:197706
IG_like 2496..2576 CDD:214653
IGc2 2507..2566 CDD:197706
IG 2589..2669 CDD:214652
IGc2 2597..2659 CDD:197706
IG 2679..2760 CDD:214652
IGc2 2687..2750 CDD:197706
I-set 2764..2851 CDD:254352
Ig 2770..2845 CDD:299845
IG 2863..2943 CDD:214652
Ig 2873..2942 CDD:299845
IG_like 2954..3032 CDD:214653
IGc2 2963..3023 CDD:197706
IG_like 3046..3122 CDD:214653
IGc2 3051..3113 CDD:197706
IG_like 3133..3214 CDD:214653
Ig 3144..3213 CDD:299845
IG 3224..3303 CDD:214652
IGc2 3232..3293 CDD:197706
IG_like 3316..3394 CDD:214653
IGc2 3321..3384 CDD:197706
TSP1 3401..3452 CDD:214559
G2F 3455..3636 CDD:284812
EGF_CA 3691..3721 CDD:214542
Furin-like 3728..3857 CDD:279142
EGF_CA 3731..3774 CDD:284955
EGF_CA 3776..3814 CDD:214542
EGF_CA 3816..3849 CDD:238011
EGF_CA 3858..3899 CDD:284955
EGF_CA 3901..3940 CDD:214542
EGF_CA 4005..4044 CDD:214542
EGF_CA 4045..4085 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.