DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-IV and side-VI

DIOPT Version :9

Sequence 1:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001036705.1 Gene:side-VI / 4379854 FlyBaseID:FBgn0083950 Length:1087 Species:Drosophila melanogaster


Alignment Length:894 Identity:307/894 - (34%)
Similarity:465/894 - (52%) Gaps:143/894 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VLGRQAMLPCDISPQERDDAVYMVLWFREGDGEPIYNFDVRGRQFGQARLWSSPTAFGTRAHFSS 148
            ::...|.:.||:...:.||.|.:|:|::  :..|||::|.||...|....|........||.|.:
  Fly    38 LVNSSAQIKCDVGSSQADDKVLLVVWYK--NNLPIYSYDTRGAHAGTPSHWRDEEVLEDRAVFRT 100

  Fly   149 TTHPAQLKIDNIRIEDEGVYRCRVDFRNSPTRNLKINLTVIVPPDRPVIYGQNRHEKAGNVESFS 213
            ...||:|.|:.::.:|.|.:||||||:.|.|||..:||.|:|||.:|:|:.:.|.........:.
  Fly   101 HKEPAELIINPVKEKDAGNFRCRVDFKLSQTRNSNVNLEV
VVPPTQPIIFNERRLRIDSRAGPYE 165

  Fly   214 EGNDIVLSCEVSGGRPRPNVTW----YLDNTAIDESFEQRPDGKTINHLSYPNVGRQHLNSRLMC 274
            ||..:.::|.|.||.|.|.|.|    .|.|:.:|.::    ||...:.|...|:.|.|.::...|
  Fly   166 EGGSLEVTCVVYGGSPPPTVIWLMNGQLQNSVVDYTY----DGAINSKLVVRNLSRIHQHAVYTC 226

  Fly   275 VASN-------TNLTPPNNRVVILDVNLKPIAVHILTKDRFVSADRTYDVECKSSGSKPPALITW 332
            .|||       ||:|        :|:.|:|:.|.|...::.:||||.|::||::.||:|||.|||
  Fly   227 QASNFHKKYVATNIT--------I
DLYLRPLLVEISFNNQPMSADRKYEIECQAIGSRPPAKITW 283

  Fly   333 WKGSKQLKKLTKNFNEPDNQSLSILTFTPGREDDGKYLTCRAENQFIDGSAIEDKWRLIVHYQPT 397
            |.|:.:|...::..:|..|.|.|:|:.||.|||.||.|:|||.|:.:.....|...:|.|.:.||
  Fly   284 WMGNLELHGHSQKVSEDGNVSTSVLSITPTREDHGKALSCRATNELVRNGIRETAMKLNVFFIPT 348

  Fly   398 TTLKIGSSLNPDDIKEGDDAYFECIVLANPKPYKMSWFHNGKELQHNISAGVILSDQSLVLQSVS 462
            ..|.:||:|||:||:||||.||||.|.|||..||:.|.||.:.:|||..||||:|...|.||.|:
  Fly   349 LQLDLGSNLNPEDIEEGDDVYFECKVHANPAAYKVVWKHNHQIIQHNQRAGVIVSSGDLALQGVT 413

  Fly   463 RASAGDYTCLAVNSEGKGPSNPVTLRIRYAPICATDHEELLGALKHETLPLKCEVDSSPPADSFQ 527
            |..||:|||.|.|.||.|.||.|.|::.|.|||..|.:::.|..::|...:.||||:.||.::|:
  Fly   414 RHQAGNYTCTASNVEGDGDSNVVELKVMYKPICRPDQKKIYGVARNEAAEIVCEVDAFPPPENFK 478

  Fly   528 WTFNSSGEQTELPA---RLHSSETGMSRLNYTPSTDLDYGTISCWAKNSIGTQKSPCVFQIVAAG 589
            |:||::.|..::|.   |.||::.  |.|.|||..::|:|||.|||.|::|.||.||||.::|||
  Fly   479 WSFNNTAETFDMPQSGFRPHSAQG--STLTYTPVKEMDFGTIMCWADNNVGQQKEPCVFHLIAAG 541

  Fly   590 RPFPLQNCSVTNQSVDSLQVDCLEGFDGGLPQGFMLELVELNTLRLARNITVSHTPVTFVIDNLD 654
            :|....||:|.||:.|||:|.|:||||||:.|.|::|:.:.::.:|..||:.....::  :..||
  Fly   542 KPEAPTNCTVVNQTSDSLEVYCIEGFDGGMRQWFLMEIFDQHSGQLQANISAKFAALS--VTGLD 604

  Fly   655 QAATYRMVIFAVNAKGRSEPTIIDDINFKGVAKFTGASTGL--------SMPLSPFLAGLTLFCG 711
            ....:|:.::|||.:|||:...:|....|...|.|.|.|..        :..|:|.|: :.:|.|
  Fly   605 AGRLFRIYVYAVNGRGRSDAIALDGYTLKAAEKQTVALTSYKGSAQSPDNFELTPILS-IGIFVG 668

  Fly   712 LLFAIFCIMLAAIYRRISNRRSDSNLKVAKHTQLTIPADCQLDPLHPGVQTDGSGNHQPHHSL-L 775
            :|.||.||.:..|        :...|:..||.|       |...:||..:....||.|....: |
  Fly   669 ILVAIVCIGIGTI--------AALKLRSHKHQQ-------QQKFVHPNAKFSRPGNLQIKDKISL 718

  Fly   776 PLNCDGRNAVDCGALGDVGGGGVGVGLDGGIKGSSPIGLVAMPGDTLRSNARNRHSPMADQADID 840
            ||:                                                   ||    :...|
  Fly   719 PLS---------------------------------------------------HS----EEMYD 728

  Fly   841 DTDPDVIP-----NQYEKRPLKSLVSPPGFASPSNRLMQRDYLRETELT-KGGSDVGMGAAEGLS 899
            :.:|||:|     .:|:::  .:..:|.|..|.::         |.|:: |.||..|.|..:..|
  Fly   729 EKNPDVVPYNEVDGEYKQK--SATQTPSGHLSTTS---------EVEISCKPGSTSGTGIVQANS 782

  Fly   900 S-IGLMSSSGNEVLHY-----TFRPSKQISYATLNKKGITTCSPPLGSL 942
            : .|...||.::.|||     |..||   ..:..:|||     .|:|.:
  Fly   783 ADSGTYQSSKDDELHYAELSLTNMPS---GSSGASKKG-----QPMGGV 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IVNP_001034052.2 V-set 79..188 CDD:284989 37/103 (36%)
IG_like 80..188 CDD:214653 37/103 (36%)
Ig 210..281 CDD:299845 24/81 (30%)
Ig 319..392 CDD:299845 31/72 (43%)
IG_like 319..383 CDD:214653 29/63 (46%)
IG_like 412..489 CDD:214653 44/76 (58%)
IGc2 413..478 CDD:197706 37/64 (58%)
Ig_3 509..572 CDD:290638 28/65 (43%)
fn3 593..675 CDD:278470 31/81 (38%)
side-VINP_001036705.1 IG_like 35..140 CDD:214653 37/103 (36%)
Ig_3 157..230 CDD:290638 21/76 (28%)
IG_like 165..242 CDD:214653 26/88 (30%)
Ig 265..343 CDD:299845 33/77 (43%)
IG_like 267..343 CDD:214653 32/75 (43%)
IG_like 363..440 CDD:214653 44/76 (58%)
IGc2 364..429 CDD:197706 37/64 (58%)
IG_like 456..532 CDD:214653 32/77 (42%)
Ig_3 456..524 CDD:290638 28/69 (41%)
fn3 545..622 CDD:278470 29/78 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470107
Domainoid 1 1.000 41 1.000 Domainoid score I12487
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D139790at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23278
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1676
76.850

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