DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-IV and side

DIOPT Version :9

Sequence 1:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001247334.1 Gene:side / 43300 FlyBaseID:FBgn0016061 Length:986 Species:Drosophila melanogaster


Alignment Length:1045 Identity:307/1045 - (29%)
Similarity:468/1045 - (44%) Gaps:242/1045 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LLMLSGISQVCSTYVEQDELMQNLDRPVPLTTVQGVLGRQAMLPCDISPQERDDAVYMVLWFREG 113
            |::|:.:.|:.|  |..||..|:..:.:|...|...||:...||||::|....|:|.::|||::.
  Fly    70 LVLLTCLQQLKS--VSADEESQDFQKNIPARLVWAALGKTVELPCDLTPPTSQDSVKLLLWFKDT 132

  Fly   114 DGEPIYNFDVRGRQFGQARLWSSPTA-----FGTRAHFSSTTHP--AQLKIDNIRIEDEGVYRCR 171
            .|.|:|:.|.||   |..:|  :|.|     .|.|..||...:|  ::|:|::::.||.||||||
  Fly   133 TGIPLYSLDSRG---GNVKL--APHAAIASDLGQRLFFSIGDNPKDSRLQINDVKPEDGGVYRCR 192

  Fly   172 VDFRNSPTRNLKINLTVIVPPDRPVIYGQNRHEKAGNVESFSEGNDIVLSCEVSGGRPRPNVTWY 236
            |||.||||||.:.|||::|||:.|.|:.....|.:.....|.||.::.|.|:|.||||.|.|||:
  Fly   193 VDFFNSPTRNFRHNLTLVVPPEEPRIFDAQGKEISQMAGPFREGYELFLCCQVRGGRPPPKVTWW 257

  Fly   237 LDNT-AIDESFEQRPDGKT--INHLSYPNVGRQHLNSRLMCVASNTNLTPPNNRVVILDVNLKPI 298
            .|:| .|..|.....:|.|  :|.|......|.....|:.|.|..|.|..|..:.|.:.|.|||:
  Fly   258 RDDTELIGTSHTSVEEGATVMVNQLLIGTTTRDFYGIRIECRAQGTRLVDPVRKDVTVQVYLKPV 322

  Fly   299 AVHILTKDRFVSADRTYDVECKSSGSKPPALITWWKGSKQLK--KLTKNFNEPD-NQSLSILTFT 360
            .|.|.|.:..::|.:...:.|:|.||.|.|.|||....:.::  ::|.:.::.| |.:.||||..
  Fly   323 RVKIATPNELLTAGQPMPIRCESWGSYPAAKITWLLDGEPIRNAEVTVHSDKEDGNITTSILTLK 387

  Fly   361 PGREDDGKYLTCRAENQFIDGSAIEDKWRLIVHYQPTTTLKIGSSLNPDDI---KEGDDAYFECI 422
            ...|:|...|||||.|.:..|.|||||..:.|.|.||.::.:.:. :|..:   .||.:..|:|.
  Fly   388 VTSENDNAELTCRATNPWFSGGAIEDKRIIRVAYPPTVSVHLANE-DPSRLVTRAEGQNVTFKCR 451

  Fly   423 VLANPKPYKMSWFHNGKELQHNISAGVILSDQSLVLQSVSRASAGDYTCLAVNSEGKGPSNPVTL 487
            ..|.|.....|||.||..:...       |.:.:.|..:.|.|||.|.|.|.|:||:..|:.:||
  Fly   452 ADARPPVTSYSWFKNGMRMSGE-------STEIMHLTQLERESAGAYACGATNTEGETRSSSLTL 509

  Fly   488 RIRYAPICATDHEEL-LGALKHETLPLKCEVDSSPPADS--FQWTFNSSGEQTE-LPARLHSSET 548
            :::::|.|.:..|:. :||:...::.:|||||:.|| ||  |.||:|::...:. |.:|:.|:  
  Fly   510 KVQFSPRCKSGTEQTSIGAVSLHSILVKCEVDADPP-DSVRFSWTYNNTRNVSPVLNSRIQSN-- 571

  Fly   549 GM-SRLNYTPSTDLDYGTISCWAKNSIGTQKSPCVFQIVAAGRPFPLQNCSVTNQSVDSLQVDCL 612
            |: |.:.|.|.||.:..|::|||.|::|.|.:||:..|:.|..|...:.|.:.|.:|  |:|.|:
  Fly   572 GLASTVTYLPQTDSELITLACWASNAVGRQTTPCLVHILPANTPEAPKACELRNDTV--LEVVCV 634

  Fly   613 EGFDGGLPQGFMLELV------------------------------ELNTLRLARNITVSHTPV- 646
            .|.||||.|.||||:|                              |::||    |...:..|: 
  Fly   635 AGSDGGLSQYFMLEVVGGDPLYSGDPGGSAGQGRGQFSEAIGLGDNEISTL----NDQATSAPIF 695

  Fly   647 -------TFVIDNLDQAATYRMVIFAVNAKGRSEPTIIDDINFKGVAKFTGASTGLSMPLSPFLA 704
                   .|.::||:....|:.:::||||||||||.::.:                         
  Fly   696 RMQENSPQFRLNNLEPGREYQFLVYAVNAKGRSEPPVVIE------------------------- 735

  Fly   705 GLTLFCGLLFAIFCIMLAAIYRRISNRRSDSNLKVAKHTQLTIPADCQLDPLHPGV-QTDGSGNH 768
                                           |::||          .||.|....: ..|.:...
  Fly   736 -------------------------------NVRVA----------AQLGPYDESILSEDPTPAE 759

  Fly   769 QPHHSLLPLNCDGRNAVDCGALGDVGGGGVGVGL-DGGIKGSSP--------IGLVAMPGDTLRS 824
            ..||               |. |.|||.|...|| .|...||.|        :..|.:.|..:.:
  Fly   760 TTHH---------------GG-GGVGGSGSSSGLGTGASTGSGPEKQSTLLILAAVVVIGAVVVT 808

  Fly   825 N---------ARNRHSPMADQADIDDTDPDVIPNQYEK--RPLKSLVSPPGFASPSNRLMQRDYL 878
            :         .|:|..|           |:  |.:..|  ||.::.|       || ..::.|.|
  Fly   809 SIIVAGIVVVCRHRPRP-----------PE--PQEVRKSMRPARNDV-------PS-MYIEEDEL 852

  Fly   879 RETELTKGG---SDVGMGAAE---------GLSSIGLMSSSGNEVL------HYTFRPSKQISYA 925
            .|.|  :||   :|:....|.         |:...|.:.|||..::      ||.  ....|.||
  Fly   853 NELE--EGGGRAADIRARVAPPNSHLCGGGGMPMPGGVGSSGGAIVGVAGPHHYI--SESFIQYA 913

  Fly   926 TLNKKG------ITTCSPPLGSLNYSVST---STPTSSYHLTPQPMEVSLL-SPNNPSVTSSLSE 980
            ..:..|      :.|.|.|. |.|.::|:   :.|.:.  |.|.|...:.. .|..|.:.....|
  Fly   914 QPSLNGDVLLPLLVTSSQPC-STNSTISSVVLAMPQAK--LCPDPASRNTAWPPEYPDLILPRGE 975

  Fly   981 YRFRT 985
            ..|.|
  Fly   976 LEFTT 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IVNP_001034052.2 V-set 79..188 CDD:284989 49/115 (43%)
IG_like 80..188 CDD:214653 49/114 (43%)
Ig 210..281 CDD:299845 27/73 (37%)
Ig 319..392 CDD:299845 30/75 (40%)
IG_like 319..383 CDD:214653 25/66 (38%)
IG_like 412..489 CDD:214653 26/76 (34%)
IGc2 413..478 CDD:197706 21/64 (33%)
Ig_3 509..572 CDD:290638 26/66 (39%)
fn3 593..675 CDD:278470 35/119 (29%)
sideNP_001247334.1 V-set 95..211 CDD:284989 51/120 (43%)
IG_like 100..211 CDD:214653 50/115 (43%)
Ig 235..301 CDD:299845 24/65 (37%)
Ig 326..408 CDD:299845 27/81 (33%)
IG_like 329..407 CDD:214653 25/77 (32%)
IG_like 435..511 CDD:214653 26/82 (32%)
Ig_2 442..511 CDD:290606 26/75 (35%)
FN3 <700..735 CDD:238020 14/34 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470105
Domainoid 1 1.000 41 1.000 Domainoid score I12487
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D139790at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23278
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1676
76.850

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