DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-IV and side-VII

DIOPT Version :10

Sequence 1:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_649933.1 Gene:side-VII / 41184 FlyBaseID:FBgn0037736 Length:939 Species:Drosophila melanogaster


Alignment Length:981 Identity:323/981 - (32%)
Similarity:490/981 - (49%) Gaps:155/981 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LPLLMLSGISQVCSTYVEQDELMQNLDRPVPLTTVQGVLGRQAMLPCDISPQERDDAVYMVLWFR 111
            |.||.:..:..:.|:...:|         ||:..::.::|....|||:::..:.|:.| :|||:|
  Fly     3 LLLLFMLALQLIESSIGSKD---------VPIHQIESIVGENIYLPCNVTTYDGDEPV-LVLWYR 57

  Fly   112 EGDGEPIYNFDVRGRQFGQARLWSSPTAFGTRAHFSSTTHPAQLKIDNIRIEDEGVYRCRVDFRN 176
            :..|.|||:.|:|.......:.||..:.||.||:|.....|.:|.|.|.:..|.|.|||||||..
  Fly    58 DDKGTPIYSIDIRAGVSKAPKRWSDDSVFGDRAYFIFDKEPGKLSIQNTQASDSGTYRCRVDFLK 122

  Fly   177 SPTRNLKINLTVIVPPDRPVIYGQNRHEKAGNVESFSEGNDIVLSCEVSGGRPRPNVTWYLDNTA 241
            :.|.|.:|.|.||.||.:.:|...:..|::..|..:|||:.:.|.|:|.||.|.|.::||.|...
  Fly   123 AQTINSRIRLNVISPPKQVIIRDSSNVERSTVVGPYSEGDIVSLKCQVIGGYPTPTISWYRDGIE 187

  Fly   242 IDESFEQRPDGKTIN-HLSYPNVGRQHLNSRLMCVASNTNLTPPNNRVVILDVNLKPIAVHILTK 305
            |.........||.|. .::.|::||:.|||||.|.|.:....|....||.:|:|..|:.:.:|..
  Fly   188 IPCELSHLAGGKIIECEITLPSLGREDLNSRLTCRALSHPRAPIVEAVVQIDMNFAPLNIRLLGA 252

  Fly   306 DRFVSADRTYDVECKSSGSKPPALITWWKGSKQLKKLTKNFNEPDNQSLSILTFTPGREDDGKYL 370
            .:.:||.|.||:.|:|:||:|||:||||:...:|:|.|:..:...||:.|.|:.:..:.|.||||
  Fly   253 HQPLSAGRRYDLLCQSAGSRPPAVITWWQNGIRLEKTTETTSSDGNQTTSTLSISLSKSDAGKYL 317

  Fly   371 TCRAENQFIDGSAIEDKWRLIVHYQPTTTLKIGSSLNPDDIKEGDDAYFECIVLANPKPYKMSWF 435
            :|:|.|..:....:||.|:|.:.|.|...:::|:||:|..::||.|.||:|:|:|:|..:::.|.
  Fly   318 SCKAYNHAVPSEPLEDGWKLDIQYVPEAYVRLGTSLDPSTLREGTDVYFDCLVMAHPNVFRIEWR 382

  Fly   436 HNGKELQHNISAGVILSDQSLVLQSVSRASAGDYTCLAVNSEGKGPSNPVTLRIRYAPICATDHE 500
            ||.:.|.||||.|||:|:.|||||.|:||:||:|:|:..|:||:|.|.|..|.|.|||.||.:.:
  Fly   383 HNEQPLSHNISLGVIISNHSLVLQGVTRATAGNYSCVGFNAEGEGISAPFALNILYAPTCAQNQK 447

  Fly   501 ELLGALKHETLPLKCEVDSSPPADSFQWTFNSSGEQTELPARLHSSETG-MSRLNYTPSTDLDYG 564
            ::.|..|.|...:.|.||::|....|.||||:|.|..:: |..|...:| .|.:.|||.|:||||
  Fly   448 KVYGIAKQEDAKVMCTVDANPREVEFSWTFNNSAESIDV-ATNHIIRSGTTSIVTYTPITELDYG 511

  Fly   565 TISCWAKNSIGTQKSPCVFQIVAAGRPFPLQNCSVTNQSVDSLQVDCLEGFDGGLPQGFMLELVE 629
            |:.|.|.|.||.|:.||||.|:|||||..:.||:|.|.|:.||.|.|.:||:|||||.|.|||::
  Fly   512 TLLCLASNKIGKQRVPCVFHIIAAGRPEKVHNCTVNNISMTSLTVTCSDGFNGGLPQSFNLELLD 576

  Fly   630 LNTLRLARNITVSHTPVTFVIDNLDQAATYRMVIFAVNAKGRSEPTIIDDINFKGVAK-FTGAST 693
            ..|..:..|||  .|...|.:..|...:.||:.|:|.|.||||:|.|::....:...| .|...|
  Fly   577 SYTQEIKANIT--STIPKFTVPGLSPGSIYRLNIYAFNTKGRSDPAIVNAAMLRMPEKQLTSEQT 639

  Fly   694 G------LSMPLSPFLAGLTLFCGLLFAIFCIMLA------AIYRRISNRRSDSNLKVAKHTQLT 746
            .      |..|:.....||||  .:|.|:..|:||      |..||.....|:.|:...:     
  Fly   640 HNLRAELLFSPVMSLTIGLTL--AVLVAVLAIILALRIPCTASSRRRQKELSNENISRDE----- 697

  Fly   747 IPADCQLDPLHPGVQTDGSGNHQPHHSLLPLNCDGRNAVDCGALGDVGGGGVGVGLDGGIKGSSP 811
                      .||.....||:.:               ||                         
  Fly   698 ----------SPGPSDKSSGSKE---------------VD------------------------- 712

  Fly   812 IGLVAMPGDTLRSNARNRHSPMADQADIDDTDPDVIPNQYE---------KRPLKSLVSPPGFAS 867
                                      |.|:.:|||:|...|         ||...|.:...  .|
  Fly   713 --------------------------DCDEKNPDVVPESIEPDEQAESIRKRQQISTIDTN--RS 749

  Fly   868 PSNRLM--QRDYLRETELTKGGSDVGMG--------AAEGLSSIGLMSSSGNEVLHYTFRPSKQI 922
            |:..:.  ::.:|...|::...|. |:|        .|:..||:|.:|.:   |..:.:  |..|
  Fly   750 PNRGIFVNEQQHLTAAEISLRASH-GIGYCTLRSGMHAQAQSSVGEISIN---VTPHVY--SNSI 808

  Fly   923 SYATLNKKGITTCSPPLGSLNYSVSTSTPTSSYH-LT-------------PQPMEVSLLSPNNPS 973
            |..||.::   :......:.|.:::.:.|||::| ||             .||:.....||:..|
  Fly   809 SQCTLPRQ---SSQNVWNNYNCNITGARPTSTFHQLTFPQGRVNVGGHNPAQPLHGHAPSPSQAS 870

  Fly   974 VTSSLS 979
            .:|..|
  Fly   871 NSSMAS 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IVNP_001034052.2 V-set 79..188 CDD:462230 40/108 (37%)
Ig 210..281 CDD:472250 27/71 (38%)
Ig strand B 218..222 CDD:409353 1/3 (33%)
Ig strand C 232..236 CDD:409353 0/3 (0%)
Ig <317..392 CDD:472250 30/74 (41%)
Ig strand C 329..333 CDD:409353 2/3 (67%)
Ig strand E 355..359 CDD:409353 2/3 (67%)
Ig strand F 369..374 CDD:409353 3/4 (75%)
Ig strand G 385..388 CDD:409353 2/2 (100%)
Ig 411..479 CDD:472250 35/67 (52%)
Ig strand B 417..421 CDD:409353 2/3 (67%)
Ig strand C 431..435 CDD:409353 0/3 (0%)
Ig strand E 454..458 CDD:409353 2/3 (67%)
Ig strand F 468..473 CDD:409353 2/4 (50%)
Ig 494..576 CDD:472250 33/82 (40%)
Ig strand B 511..515 CDD:409353 0/3 (0%)
Ig strand C 525..529 CDD:409353 1/3 (33%)
Ig strand E 551..555 CDD:409353 1/3 (33%)
Ig strand F 566..570 CDD:409353 1/3 (33%)
fn3 593..675 CDD:394996 36/81 (44%)
side-VIINP_649933.1 V-set 32..134 CDD:462230 40/102 (39%)
Ig_3 160..223 CDD:464046 25/62 (40%)
Ig 256..328 CDD:472250 31/71 (44%)
Ig strand B 262..266 CDD:409353 2/3 (67%)
Ig strand C 276..280 CDD:409353 2/3 (67%)
Ig strand E 302..306 CDD:409353 2/3 (67%)
Ig strand F 316..321 CDD:409353 3/4 (75%)
Ig 351..426 CDD:472250 38/74 (51%)
Ig strand B 364..368 CDD:409353 2/3 (67%)
Ig strand C 375..382 CDD:409353 0/6 (0%)
Ig strand E 401..405 CDD:409353 2/3 (67%)
Ig strand F 415..420 CDD:409353 2/4 (50%)
Ig_3 <456..519 CDD:464046 27/63 (43%)
FN3 538..620 CDD:238020 37/83 (45%)

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