DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-IV and nrm

DIOPT Version :10

Sequence 1:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001246890.1 Gene:nrm / 40515 FlyBaseID:FBgn0262509 Length:2192 Species:Drosophila melanogaster


Alignment Length:1011 Identity:222/1011 - (21%)
Similarity:364/1011 - (36%) Gaps:232/1011 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LMLSGISQVCSTYVEQDELMQNLDRPVPLTTVQGVLGRQAMLPCDISPQERDDAVYMVLWFREGD 114
            :.||.:..:|...|  |.....:|     ||:.....:..:|||.:. .|:...::.:.||: ||
  Fly    25 ISLSLVLVLCLALV--DSSTAQVD-----TTISQQESQSVVLPCPVD-AEKCGKLHSLNWFK-GD 80

  Fly   115 GEPIYNFDVRGRQFGQARLWSSPTAFGTRAHFSSTTHPAQLKIDNIRIEDEGVYRCRVDF----- 174
            ..      :.....|.:.:.|....|..|.  :...:|.:|.|.:::|.||.:|.|...|     
  Fly    81 DR------IAAMLLGDSNVTSVNKEFDERV--TVEQNPYRLVIKDLKIADEDIYLCDTTFFIPEE 137

  Fly   175 RNSPTRNLKINLTVIVPPDRPVIYGQ--NRHEKAGNVESFSEGNDIVLSCEVSGGRPRPNVTWYL 237
            ........:|.|.|:|||...||...  :|.:....|....|...:..:|.|...||:|.|:|:.
  Fly   138 TCDNFNGYRIELRVLVPPTEVVILDAKGDRIKNGSVVGPMQERQSLKATCTVRNTRPQPEVSWFR 202

  Fly   238 DNTAID--ESFEQRPDGKTINHLSYP-NVGRQHLNSRLMC---VASNTNLTPPNNRVVILDVNLK 296
            ....:.  .......||...:.|... .:.|:.|...:.|   .|:..|:|.....|   |:.::
  Fly   203 GTKRLTTYSPTHDLVDGLYTSTLELDWTLSREDLAQDIECRVKSAAIQNVTVTKFSV---DLQVR 264

  Fly   297 PIAVHIL-TKDRFVSADRTYDVECKSSGSKPPALITWW-------KGSKQLKKL-TKNFNEPDN- 351
            |.::.|. .|...|...:.. :.|...|::|...:||:       .|..::.:: :|:..:.|. 
  Fly   265 PTSIDINGVKHHTVQGSKVV-LTCDIHGARPAVNLTWYNTTTIISSGENEITEVRSKSLEKSDGT 328

  Fly   352 -QSLSILTFTPGREDDGKYLTCRAEN---QFIDGSAIEDKWRLIVHYQPTTTLKIGSS---LNPD 409
             .:.|.|.|...|.::.:...|.|||   |......|.....|.|.|.|  .:|:..|   .|..
  Fly   329 FHTQSELIFNATRFENDRVFRCEAENIVLQINREKPISSALTLEVLYPP--VVKVSPSAITANTS 391

  Fly   410 DIKEGDDAYFECIVLANPKPY-KMSWFHNGKELQHNIS-----AGVILSDQSLVLQSVSRASAGD 468
            :|     ....|...|||... ::.|:.|  ::..|::     .|....:.:||::|..:...|:
  Fly   392 EI-----VLLNCEYFANPASLTQVEWYRN--DILVNVNDTTHYKGGNSENVALVIKSTEKEDIGN 449

  Fly   469 YTCLAVNSEGKGPSN-PVTLRIRYAPICATDHEELL----GALK---HETLPLKCEV-DSSPPA- 523
            |:|...|:.|||.|: .:.|.::|||..     |:|    |.:|   ...:.|.|.| |::|.. 
  Fly   450 YSCQLSNNIGKGTSDQKINLDVQYAPTV-----EILMIPEGPVKESDESNVTLFCNVLDANPSVL 509

  Fly   524 DSFQWTFNSSGEQTELPARLHSSETGMSRLNYTPSTDL-------DYGTISCWAKNSIG------ 575
            ...:|..||: ...|||   ...||.....:..||..|       .:...||...|:.|      
  Fly   510 TKVRWYANST-LLKELP---DCEETREDLCHIDPSKLLLESIGRGFFYNYSCEGFNAAGWGPRSE 570

  Fly   576 -------TQKSPCVFQIVAAGRPFPLQNCSVTNQSVD-SLQVDCLEGFDGGLPQGFMLELVELNT 632
                   .:..|      ||...|||  .:|..:||. |..||     |.|.|        |.|.
  Fly   571 DKELLVHYEPGP------AALSHFPL--VAVKKKSVTFSCSVD-----DPGFP--------ESNR 614

  Fly   633 LRLARN--------ITVSHT--PVTFVIDNLDQAATYRMVIFAVNAKGRSEPTIIDDINFKGVAK 687
            .|..|.        :|...|  ||     .||....|.  .:|.|..|            |||. 
  Fly   615 FRWLRGGRGPLQDIVTKDWTVEPV-----GLDSRTNYS--CYAYNEGG------------KGVM- 659

  Fly   688 FTGASTGLSMPLSP-FLAGLTLFCGLLFA---------IFCIMLAAIYRR---ISNRRSDSNLKV 739
               |:..|.:...| |:..|..:.|:|.:         |.|:....|..:   :...|:||...:
  Fly   660 ---ATVNLEVHAPPFFIKNLPPYTGILHSSPNATLTCRIECVPRCDISWQKDGVPIERNDSRYFI 721

  Fly   740 AKHTQLTIPA----DCQLDPLHPGVQTDGSGNHQPHHSLLPLNCDGRNA-VDCGALGDVGGGGVG 799
            .:......||    :..|..||         .:.|:......|.:..|| ..|.:.|::.|    
  Fly   722 KEKYMDASPATGDFESMLSVLH---------FNMPNWPDSKFNIEADNANYSCVSTGNIVG---- 773

  Fly   800 VGLDGGIKGSSPIGLVAMPGDTLRSNARNRHSPMADQADIDDTDPDVIPNQYEKRPLKSLVSPPG 864
                |.|:..:..|:...|.:|..|.            :|.....|.||.:.   ..||..:|  
  Fly   774 ----GSIRSRTYFGIEYAPENTTVSE------------NIVYVQEDTIPGRV---ICKSRANP-- 817

  Fly   865 FASPSNRLMQRDYLRETELTKGGSDVGMGAAEGLSSIGLM---------SSSGNEVLHYTFRPSK 920
              .||.:     ::.:.|....|:.:.:..|...:..|..         ||....|:...|:|..
  Fly   818 --EPSYK-----WIFKNETIANGNALIINTAMNRNDDGTYTCLAYNKHGSSIAKTVIKVQFKPRC 875

  Fly   921 QISYATLNKKGITTC----SPPLGSLNYSVSTSTPT 952
            :|....::.:....|    :|.....::|:.|...|
  Fly   876 EIERQEIDDQDTLICTAYGNPIEADFSWSIKTENET 911

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IVNP_001034052.2 V-set 79..188 CDD:462230 25/113 (22%)
Ig 210..281 CDD:472250 15/76 (20%)
Ig strand B 218..222 CDD:409353 0/3 (0%)
Ig strand C 232..236 CDD:409353 1/3 (33%)
Ig <317..392 CDD:472250 19/87 (22%)
Ig strand C 329..333 CDD:409353 1/3 (33%)
Ig strand E 355..359 CDD:409353 2/3 (67%)
Ig strand F 369..374 CDD:409353 1/4 (25%)
Ig strand G 385..388 CDD:409353 0/2 (0%)
Ig 411..479 CDD:472250 16/73 (22%)
Ig strand B 417..421 CDD:409353 0/3 (0%)
Ig strand C 431..435 CDD:409353 0/3 (0%)
Ig strand E 454..458 CDD:409353 1/3 (33%)
Ig strand F 468..473 CDD:409353 2/4 (50%)
Ig 494..576 CDD:472250 24/110 (22%)
Ig strand B 511..515 CDD:409353 1/3 (33%)
Ig strand C 525..529 CDD:409353 0/3 (0%)
Ig strand E 551..555 CDD:409353 0/3 (0%)
Ig strand F 566..570 CDD:409353 2/3 (67%)
fn3 593..675 CDD:394996 25/92 (27%)
nrmNP_001246890.1 V-set 44..152 CDD:462230 26/122 (21%)
Ig strand B 183..187 CDD:409353 0/3 (0%)
Ig <185..248 CDD:472250 13/62 (21%)
Ig strand C 197..201 CDD:409353 1/3 (33%)
Ig strand E 225..229 CDD:409353 1/3 (33%)
Ig strand F 239..244 CDD:409353 1/4 (25%)
Ig strand G 253..256 CDD:409353 1/2 (50%)
Ig 277..354 CDD:472250 15/77 (19%)
Ig strand B 283..287 CDD:409353 0/4 (0%)
Ig strand C 297..301 CDD:409353 1/3 (33%)
Ig strand E 333..337 CDD:409353 2/3 (67%)
Ig strand F 347..352 CDD:409353 1/4 (25%)
Ig_3 376..456 CDD:464046 19/88 (22%)
Ig 676..779 CDD:472250 23/119 (19%)
Ig strand B 689..693 CDD:409353 0/3 (0%)
Ig strand C 702..706 CDD:409353 1/3 (33%)
Ig strand E 734..741 CDD:409353 1/6 (17%)
Ig strand F 762..767 CDD:409353 1/4 (25%)
Ig <811..869 CDD:472250 12/66 (18%)
Ig strand C 820..824 CDD:143205 1/8 (13%)
Ig strand F 849..854 CDD:143205 0/4 (0%)
Ig strand G 862..865 CDD:143205 0/2 (0%)
PTZ00112 1747..>1940 CDD:240274
Blue background indicates that the domain is not in the aligned region.

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