DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-IV and side-VIII

DIOPT Version :9

Sequence 1:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001097382.2 Gene:side-VIII / 37310 FlyBaseID:FBgn0086604 Length:1201 Species:Drosophila melanogaster


Alignment Length:1045 Identity:329/1045 - (31%)
Similarity:486/1045 - (46%) Gaps:210/1045 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RQLLLP--LLMLSGIS---------QVCSTYV------EQDELMQNLDRPVPLT-TVQGVLGRQA 89
            |.|.||  ||:||.::         :|.|:..      |::.|:..|..|..|: ::.|.:||  
  Fly     7 RSLFLPLCLLVLSALNGPAAAASRVRVSSSTTMTRNIEEENALLLLLAGPPVLSESIMGTVGR-- 69

  Fly    90 MLPCDISPQERDDAVYMVLWFREGDGEPIYNFDVRGRQFGQARLWSSPTAFGTRAHFSSTTHPAQ 154
             |||:::|...:|.|.:|:|::.|...|||:.|.|...|.|...||..| :..|..|........
  Fly    70 -LPCNVTPPIYEDRVALVIWYKVGLKTPIYSVDTRDSNFAQGTHWSDET-YRERLSFHVEGRAGT 132

  Fly   155 LKIDNIRIEDEGVYRCRVDFRNSPTRNLKINLTVIVPPDRPVIYGQNRHEKAGNVES-----FSE 214
            |.|.:...:|.|.|||||||:.|||||.|:|||||:||:..:|.    ..|...:|.     ::|
  Fly   133 LTIKSTTEDDTGEYRCRVDFQKSPTRNSKVNLTVIIPPESVIIL----DSKGVTIEDHTLGPYNE 193

  Fly   215 GNDIVLSCEVSGGRPRPNVTWYLDNT-----AIDESFEQRPDGKTINHLSYPNVGRQHLNSRLMC 274
            |:.|.::|...||||:|.|||...||     ::.:...:|..|.|   ||...:.|::|:.:|.|
  Fly   194 GSGINITCVAIGGRPQPRVTWLHGNTVYKNASVGQPLSERRVGNT---LSLARLERRNLHMQLTC 255

  Fly   275 VASNTNLTPPNNRVVILDVNLKPIAVHILTKDRFVSADRTYDVECKSSGSKPPALITWWKGSKQL 339
            .|.|.|||.|....|:||:||:|:.|.:..::|.:||..:|.:.|...|::|...|||||||..:
  Fly   256 RAENNNLTTPIISSVVLDMNLRPLIVKLQGENRALSAGNSYQLSCVVIGARPAPTITWWKGSTPM 320

  Fly   340 KKLTKNFNEPD-NQSLSILTFTPGREDDGKYLTCRAENQFIDGSAIEDKWRLIVHYQPTTTLKIG 403
            |. |.....|| |.:.|:|||||..:|.||:|:||||...|..|.:||.|:|.:::.|..:|::|
  Fly   321 KN-THEIATPDGNLTTSVLTFTPTIDDRGKFLSCRAEQSMIPESGMEDGWKLDIYHIPVVSLELG 384

  Fly   404 SSLNPDDIKEGDDAYFECIVLANPKPYKMSWFHNGKELQHNISAGVILSDQSLVLQSVSRASAGD 468
            ::.....::||.|.:|||.:.:||..|::||.||||.|.:|.:.|:.:|:||||||:.|||.:|.
  Fly   385 TNSLNSTLREGIDVFFECNIKSNPWIYEVSWRHNGKILTNNPAEGIAVSNQSLVLQNASRARSGI 449

  Fly   469 YTCLAVNSEGKGPSNPVTLRIRYAPICATDHEELLGALKHETLPLKCEVDSSPPADSFQWTFNSS 533
            |||:..|.||.|.||||.|.||:||:|.........:.:|||:.:.||:|::|...::.|.||::
  Fly   450 YTCVGSNREGDGESNPVQLDIRFAPVCRPRQRLSYSSGRHETVKVACEIDANPAEATYVWKFNAT 514

  Fly   534 -GEQTELPARLHSSETGMSRLNYTPSTDLDYGTISCWAKNSIGTQKSPCVFQIVAAGRPFPLQNC 597
             ||..::||...:.:.|.|..:|||.|:.||||:.|||.|.||.|..|||:.|..||.|.||.||
  Fly   515 QGETVDIPASQVAVDRGRSIAHYTPMTENDYGTLLCWATNEIGDQSEPCVYTIFPAGEPDPLLNC 579

  Fly   598 SVTNQSVDSLQVDCLEGFDGGLPQGFMLELVELNTLRLARNITVSHTPVTFVIDNLDQAATYRMV 662
            :|.||:....|::|:|||:|||.|.|::|:....|.|..: |:.|..|. |.:..|.....|.:.
  Fly   580 TVLNQTSTGFQIECIEGFNGGLQQDFIMEVYMNGTTRHPK-ISKSKRPY-FEVSGLVPGMGYNVF 642

  Fly   663 IFAVNAKGRSEPTII-------------------------------------------DDINF-- 682
            :.|.|:||||..||:                                           |:..|  
  Fly   643 LIANNSKGRSNATILQVYTLKDPEKQTVKITFTKSFQGLRPAYTKTKATATTTSDCVCDEDEFLN 707

  Fly   683 --KGVAKFTGASTGLSMPLS-----------PFLAGLTLFCGLLFAIFCIMLAAIYRRISNRRSD 734
              ||::...|........||           |||..|....|.:|.:..|::..:..|.|:.|..
  Fly   708 LGKGISHDEGTDADQQEDLSLAYAPVIEDIRPFLGILAGIVGSIFLVALIIVIVVRVRGSSGRDR 772

  Fly   735 SNLKVAKHTQLTIPADCQLDPLHPGVQTDGSGNHQPHHSLLPLNCDGRNAVDCGALGDVGGGGVG 799
            :|..                  |||....|                      .|.:|...|.|.|
  Fly   773 NNYS------------------HPGSGVGG----------------------VGGVGGTTGNGSG 797

  Fly   800 VGLDGG------IKGSSPIGLVAMPGD------TLRSNARNRHSPM----------ADQADIDDT 842
            :|..||      ..|:..:||:|...:      ||..|.......|          ....|..|.
  Fly   798 MGGGGGGVGGTTANGNGSLGLLASNNNGSLVIGTLGHNGGQSVQDMHRIGRETCHVTSSLDSIDK 862

  Fly   843 DPDVIPNQYEKRPLKSLVSPPGFASPSNRLMQRDYLRETELTKGGSDVGMGAAEGLSSIGLMSSS 907
            :||:||.....                        |.:...|||.......||....:..:.|.:
  Fly   863 NPDIIPQDGHD------------------------LDDEWTTKGHGRTYATAAMAEQNAVITSGT 903

  Fly   908 GNEVLHYTFRPSKQISYATLNKKGITTCSPPLGSLNY-SVSTSTPTS--------SYHLTPQPME 963
            .:.::.         :||.::||    .:||.|...| ..:|..|.|        ...|..||.:
  Fly   904 YDHLMP---------TYAVVDKK----TAPPPGHGQYIQYNTLIPVSKMGAYANQQQQLQQQPQQ 955

  Fly   964 VSLLS 968
            .:.||
  Fly   956 KTELS 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IVNP_001034052.2 V-set 79..188 CDD:284989 43/109 (39%)
IG_like 80..188 CDD:214653 43/107 (40%)
Ig 210..281 CDD:299845 26/80 (33%)
Ig 319..392 CDD:299845 35/73 (48%)
IG_like 319..383 CDD:214653 30/64 (47%)
IG_like 412..489 CDD:214653 41/76 (54%)
IGc2 413..478 CDD:197706 33/64 (52%)
Ig_3 509..572 CDD:290638 26/63 (41%)
fn3 593..675 CDD:278470 32/81 (40%)
side-VIIINP_001097382.2 Ig 55..166 CDD:299845 45/114 (39%)
IG_like 60..166 CDD:214653 43/109 (39%)
Ig 182..266 CDD:299845 29/86 (34%)
Ig 296..373 CDD:299845 36/77 (47%)
IG_like 389..464 CDD:214653 36/74 (49%)
IGc2 394..459 CDD:197706 33/64 (52%)
Ig_3 490..554 CDD:290638 26/63 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470110
Domainoid 1 1.000 41 1.000 Domainoid score I12487
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D23448at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23278
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1676
76.850

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