| Sequence 1: | NP_001034052.2 | Gene: | side-IV / 41657 | FlyBaseID: | FBgn0038156 | Length: | 1001 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001399746.1 | Gene: | Cadm3 / 360882 | RGDID: | 1307035 | Length: | 430 | Species: | Rattus norvegicus |
| Alignment Length: | 559 | Identity: | 109/559 - (19%) |
|---|---|---|---|
| Similarity: | 182/559 - (32%) | Gaps: | 213/559 - (38%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 47 LPLLML---------SGISQVCSTYVEQDELMQNLDRPVPL-----TTV---QGVLGRQAMLPCD 94
Fly 95 ISPQERDDAVYMVLWFREGDGEPIYNFDVRGRQFGQARLWSSPTA----FGTRAHF--------S 147
Fly 148 STTHPAQLKIDNIRIEDEGVYRCRVDFRNSPTRNLKINLTVIVPPDRPVI--YGQNRHEKAGNVE 210
Fly 211 SFSEGNDIVLSCEVSGGRPRPNVTWYLDNTAIDESFEQRPDGKTINHLSYPNVGRQHLNSRLMCV 275
Fly 276 ASNTNLTPPNNRVVILDVNLKPIAVHILTKDRFVSADRTYDVECKSSGSKPPALITWWKGSKQLK 340
Fly 341 -KLTKNFNEPDNQSLSI---LTFTPGREDDGKYLTCRAENQFIDGSAIEDKWRLIVHYQPTTTLK 401
Fly 402 IGSSLNPDDIKEGDDAYFECIVLANPKPYKMSWFHNGKELQHNISAGVILSDQSLVLQSVSRASA 466
Fly 467 GDYTCLAVNSEG----------KGPSNPVTLRIRYAPICATDHEELLGA---------------- 505
Fly 506 ----LKHETLPLKCEV---DSSPPADSFQWTFNSSGEQT 537 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| side-IV | NP_001034052.2 | V-set | 79..188 | CDD:462230 | 29/123 (24%) |
| Ig | 210..281 | CDD:472250 | 0/70 (0%) | ||
| Ig strand B | 218..222 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 232..236 | CDD:409353 | 0/3 (0%) | ||
| Ig | <317..392 | CDD:472250 | 22/78 (28%) | ||
| Ig strand C | 329..333 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 355..359 | CDD:409353 | 0/6 (0%) | ||
| Ig strand F | 369..374 | CDD:409353 | 1/4 (25%) | ||
| Ig strand G | 385..388 | CDD:409353 | 0/2 (0%) | ||
| Ig | 411..479 | CDD:472250 | 15/77 (19%) | ||
| Ig strand B | 417..421 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 431..435 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 454..458 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 468..473 | CDD:409353 | 2/4 (50%) | ||
| Ig | 494..576 | CDD:472250 | 11/67 (16%) | ||
| Ig strand B | 511..515 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 525..529 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 551..555 | CDD:409353 | |||
| Ig strand F | 566..570 | CDD:409353 | |||
| fn3 | 593..675 | CDD:394996 | |||
| Cadm3 | NP_001399746.1 | IgV_1_Necl-1 | 64..158 | CDD:143290 | 24/103 (23%) |
| Ig strand A | 64..67 | CDD:143290 | 1/2 (50%) | ||
| FR1 | 65..83 | CDD:143290 | 4/24 (17%) | ||
| Ig strand A' | 68..74 | CDD:143290 | 2/12 (17%) | ||
| Ig strand B | 76..84 | CDD:143290 | 1/7 (14%) | ||
| CDR1 | 84..89 | CDD:143290 | 1/4 (25%) | ||
| FR2 | 90..97 | CDD:143290 | 2/7 (29%) | ||
| Ig strand C | 90..96 | CDD:143290 | 1/6 (17%) | ||
| CDR2 | 98..109 | CDD:143290 | 2/10 (20%) | ||
| Ig strand C' | 100..104 | CDD:143290 | 0/3 (0%) | ||
| Ig strand C' | 106..109 | CDD:143290 | 0/2 (0%) | ||
| FR3 | 110..145 | CDD:143290 | 11/36 (31%) | ||
| Ig strand D | 114..121 | CDD:143290 | 1/6 (17%) | ||
| Ig strand E | 124..130 | CDD:143290 | 0/5 (0%) | ||
| Ig strand F | 137..145 | CDD:143290 | 4/9 (44%) | ||
| CDR3 | 146..149 | CDD:143290 | 0/2 (0%) | ||
| Ig strand G | 149..158 | CDD:143290 | 2/8 (25%) | ||
| FR4 | 151..158 | CDD:143290 | 1/6 (17%) | ||
| Ig | 159..261 | CDD:472250 | 29/208 (14%) | ||
| Ig strand B | 180..184 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 194..198 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 224..228 | CDD:409353 | 0/3 (0%) | ||
| Ig strand F | 238..243 | CDD:409353 | 1/4 (25%) | ||
| Ig strand G | 254..257 | CDD:409353 | 0/2 (0%) | ||
| IG_like | 271..348 | CDD:214653 | 16/81 (20%) | ||
| Ig strand B | 282..286 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 296..300 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 314..318 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 328..333 | CDD:409353 | 2/4 (50%) | ||
| 4.1m | 386..401 | CDD:128590 | 3/14 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||