| Sequence 1: | NP_001034052.2 | Gene: | side-IV / 41657 | FlyBaseID: | FBgn0038156 | Length: | 1001 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038944379.1 | Gene: | Cadm2 / 360687 | RGDID: | 1305678 | Length: | 444 | Species: | Rattus norvegicus |
| Alignment Length: | 344 | Identity: | 82/344 - (23%) |
|---|---|---|---|
| Similarity: | 136/344 - (39%) | Gaps: | 69/344 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 77 PLT-TVQGVLGRQAMLPCDISPQERDDAVYMVLWFREGDGEPIYNFDVRGRQFGQARLWSSPTAF 140
Fly 141 GTRAHFSSTTHPAQLKIDNIRIEDEGVYRCRVDFRNSPTRNLKINLTVIVPPDRPVIYGQNRHEK 205
Fly 206 AGNVESFS----EGNDIVLSCEVSGGRPRPNVTWYLDNTAI-DESFEQRPDGK----TINHLSYP 261
Fly 262 NVGRQHLNSRLMCVASNTNL-TPPNNRVVILDVNLKPIAVHILTKDRFVSADRTYDVECKSSGSK 325
Fly 326 PPALITWWKGSKQLKKLTKNFNEPDNQSLSILTFTPGRE---------DDGKYLTCRAENQFIDG 381
Fly 382 SAIEDKWRLIVHYQPTTTL 400 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| side-IV | NP_001034052.2 | V-set | 79..188 | CDD:462230 | 22/109 (20%) |
| Ig | 210..281 | CDD:472250 | 17/79 (22%) | ||
| Ig strand B | 218..222 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 232..236 | CDD:409353 | 0/3 (0%) | ||
| Ig | <317..392 | CDD:472250 | 22/83 (27%) | ||
| Ig strand C | 329..333 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 355..359 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 369..374 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 385..388 | CDD:409353 | 0/2 (0%) | ||
| Ig | 411..479 | CDD:472250 | |||
| Ig strand B | 417..421 | CDD:409353 | |||
| Ig strand C | 431..435 | CDD:409353 | |||
| Ig strand E | 454..458 | CDD:409353 | |||
| Ig strand F | 468..473 | CDD:409353 | |||
| Ig | 494..576 | CDD:472250 | |||
| Ig strand B | 511..515 | CDD:409353 | |||
| Ig strand C | 525..529 | CDD:409353 | |||
| Ig strand E | 551..555 | CDD:409353 | |||
| Ig strand F | 566..570 | CDD:409353 | |||
| fn3 | 593..675 | CDD:394996 | |||
| Cadm2 | XP_038944379.1 | IgV_1_Necl-3 | 35..130 | CDD:409498 | 25/112 (22%) |
| Ig strand A | 35..38 | CDD:409498 | 1/1 (100%) | ||
| FR1 | 36..54 | CDD:409498 | 8/17 (47%) | ||
| Ig strand A' | 39..45 | CDD:409498 | 1/5 (20%) | ||
| Ig strand B | 47..55 | CDD:409498 | 3/7 (43%) | ||
| CDR1 | 55..60 | CDD:409498 | 0/4 (0%) | ||
| FR2 | 61..68 | CDD:409498 | 1/10 (10%) | ||
| Ig strand C | 61..67 | CDD:409498 | 1/9 (11%) | ||
| CDR2 | 69..80 | CDD:409498 | 2/11 (18%) | ||
| Ig strand C' | 71..75 | CDD:409498 | 0/3 (0%) | ||
| Ig strand C' | 77..80 | CDD:409498 | 1/2 (50%) | ||
| FR3 | 81..116 | CDD:409498 | 9/48 (19%) | ||
| Ig strand D | 85..92 | CDD:409498 | 2/14 (14%) | ||
| Ig strand E | 95..101 | CDD:409498 | 0/5 (0%) | ||
| Ig strand F | 108..116 | CDD:409498 | 4/9 (44%) | ||
| CDR3 | 117..120 | CDD:409498 | 0/2 (0%) | ||
| Ig strand G | 120..130 | CDD:409498 | 3/9 (33%) | ||
| FR4 | 122..129 | CDD:409498 | 2/6 (33%) | ||
| IgI_2_Necl-3 | 129..232 | CDD:409467 | 25/114 (22%) | ||
| Ig strand A | 130..133 | CDD:409467 | 0/2 (0%) | ||
| Ig strand A' | 136..140 | CDD:409467 | 2/3 (67%) | ||
| Ig strand B | 149..159 | CDD:409467 | 2/9 (22%) | ||
| Ig strand C | 162..171 | CDD:409467 | 2/8 (25%) | ||
| Ig strand C' | 172..175 | CDD:409467 | 0/2 (0%) | ||
| Ig strand D | 177..184 | CDD:409467 | 1/6 (17%) | ||
| Ig strand E | 190..200 | CDD:409467 | 1/9 (11%) | ||
| Ig strand F | 208..216 | CDD:409467 | 1/7 (14%) | ||
| Ig strand G | 224..231 | CDD:409467 | 0/6 (0%) | ||
| Ig_3 | 236..309 | CDD:464046 | 22/87 (25%) | ||
| 4.1m | 397..415 | CDD:128590 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||