DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-IV and ed

DIOPT Version :9

Sequence 1:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster


Alignment Length:1309 Identity:242/1309 - (18%)
Similarity:394/1309 - (30%) Gaps:519/1309 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 QFGQARLWSSPTAFGTRAHFSSTTHPAQLKIDNIRI-EDEGVYRCRVDFR--NSPTRNLKINLTV 188
            ||....:.....:.|.|..|........|:|.|:.. .|.|.:.||:..:  .:.......||||
  Fly    82 QFDNVAIGEVQLSSGYRLDFQPERGIYDLQIKNVSYNRDNGRFECRIKAKGTGADVHQEFHNLTV 146

  Fly   189 IVPPDRPVIYGQNRHEKAGNVESFSEGNDIVLSCEVSGGRPRPNVTWY-------LDNTAIDESF 246
            :.||..|||       ..||:...:|...:.|:|...||.|.|.:|||       |..|.:....
  Fly   147 LTPPHPPVI-------SPGNIAVATEDKPMELTCSSIGGSPDPTITWYREGSNTPLPATVLKGGT 204

  Fly   247 EQRP----------------------------DGK------TINHLSYPNVG------------- 264
            :.:|                            :||      |:|...||.|.             
  Fly   205 KDQPTNATLSIIPRREDDGAKYKCVVRNRAMNEGKRLEATATLNVNYYPRVEVGPENPLRVERDR 269

  Fly   265 -----------------RQHLNSRLM--------------------CVASNTNLTPPNNRVVILD 292
                             |.:.|.|.:                    |:|.| .|.....:.:|||
  Fly   270 TAKLECNVDAKPKVPNVRWNRNGRFISSSLVHTIHRVSVQDAGKYTCIADN-GLGKTGEQELILD 333

  Fly   293 VNLKPIAVHILTKDRFVSADRTYDVECKSSGSKPPALITWWKGSKQLKKLTKNFNEPD-NQSLSI 356
            :...|:.| |.:|.|......|..:.|..:.:..|..|.|.|.           |.|| ..:..:
  Fly   334 ILYPPMVV-IESKTREAEEGDTVTIRCNVTANPAPVTIEWLKE-----------NSPDFRYNGDV 386

  Fly   357 LTFTPGREDD-GKYLTCRAENQFIDGSAIEDKWR-------LIVHYQP----------------- 396
            ||.|..|.|. |.|: |||.| .:....:|...|       |:|.::|                 
  Fly   387 LTLTSVRADHAGNYI-CRAVN-IMQSQGMERSERVGNSTVALLVRHRPGQAYITPNKPVVHVGNG 449

  Fly   397 ---------------------------TTTLKI---GSSLNPDDIKEGDDAYFEC---------- 421
                                       ::|.||   |...:......|::..:.|          
  Fly   450 VTLTCSANPPGWPVPQYRWFRDMDGEFSSTQKILAQGPQYSIPKAHLGNEGKYHCHAVNELGIGM 514

  Fly   422 ---IVL------------------------------ANPKPY-KMSWFHNGKEL--QHNISA--- 447
               |||                              |..||. .:.|..:..|:  :.|:..   
  Fly   515 MATIVLEIHQPPQFLAKLQQHMTRRVADTDYTVTCSAKGKPAPSVKWLKDAVEILPEENLYEVQT 579

  Fly   448 -------GVILSDQSLVLQSVSRASA-----GD---YTCLAVNSEGKGPSNPVTLRIRYAPICAT 497
                   |::.....|..:..:|.:.     ||   ||||..| |....::.:.|||.:.||...
  Fly   580 NPDQGLNGMVTVQSQLKFRGKARPNGNALVPGDRGLYTCLYQN-EVNSANSSMQLRIEHEPIVLH 643

  Fly   498 DHEELLGALKHETLPLKCEVDSSPPADSFQWTFN--------SSGEQTELPARLHSSETGMSRLN 554
            .:.::...:: ||..:.|:|.:.|..: |||.|.        ||....|:.....:::...|.|.
  Fly   644 QYNKVAFDIR-ETAEVVCKVQAYPKPE-FQWQFGNNPSPLTMSSDGHYEISTTTDNNDIYTSVLK 706

  Fly   555 YTPSTDLDYGTISCWAKNSIGTQKSPCVFQIVAAGRPFPLQNCSVTNQSVDSLQVDCLEGFDGGL 619
            ....|..|||..:|...|::.|.::|  .::...|.|....|...|....:.:.:....||||||
  Fly   707 INSLTHSDYGEYTCRVANTLDTIRAP--IRLQQKGPPEKPTNLRATEVGHNYVSLSWDPGFDGGL 769

  Fly   620 P----------------------------------------------------QGFMLELVELN- 631
            .                                                    |.:..::..|| 
  Fly   770 SKTKFFVSYRRVAMPREEQLIPDCATLANSNSAWVEVDCQRDIPCKVTALEQHQSYAFKVKALNP 834

  Fly   632 ------------TLRLAR---NITVSHTPVTFVIDNLDQAATYRMVIFAVNAKGRSEP------- 674
                        |.:::|   .:.|::.|.|..: .:|..||...::..|.:...::.       
  Fly   835 KSDSPYSSEIMVTTKVSRIPPPLQVTYEPNTRTL-GIDVGATCLNLVAVVESMVNADSPMAAWEV 898

  Fly   675 -TIIDDINFKG---------VAKFTGA------------------STGL-SMPL----------- 699
             |.:|::...|         :.:..||                  ..|| |:.|           
  Fly   899 VTTMDNLQLSGNGPTHKEKIIDRIIGARRVGGGRALGHTISEDEDDNGLNSLALEDENSPTVRVK 963

  Fly   700 ------------------------------SPFLAGLTLFCGLLFAIFCIMLAAIYRRISNRRSD 734
                                          :|.|..:.:.| ::||:|..::....|  ..|...
  Fly   964 LCLRTNPEHCGDYTDAEIGRPYIAEANALATPTLIAIIVSC-VVFALFAGLILMFCR--CKRNQS 1025

  Fly   735 SNLKVAKHTQLTIPADCQLDPLHPGV-------------QTDGSGNHQPHHSL-LPLNCDGRNAV 785
            .....||        |.::|.:.|.:             ...|..|....||: |.|:.:.:...
  Fly  1026 KKSAAAK--------DYEMDSVRPSIVAAQQNQAPPPYYPASGLDNKALEHSMDLALSMEDQKTA 1082

  Fly   786 ------------DCGALG-DVGGGGVGVGLDGGIK----------GSSPIGLVAMPG---DTLRS 824
                        ..|.:| .:|||.||||:.|.:.          |.|.:|:..:||   .|:..
  Fly  1083 LYATQNGYSYHPGSGVVGVGMGGGVVGVGVGGSVVSGMGGGVGGIGGSGVGVNGIPGLSAHTMPG 1147

  Fly   825 N-------ARNRHSPMADQADIDDTD--------PDVIPNQYEKRPLKSLVSPPGFASPSNRLM- 873
            |       ..|.:|...:...::..|        ...:.||      :.:|.     :|.|:.: 
  Fly  1148 NEWVNMGYMENNYSNSNNGGSVNSQDSLWQVKMSAAAVGNQ------QGMVQ-----APMNQYVE 1201

  Fly   874 QRDYLRETELTKGGSDVGMGAAEGLSSIGLMSSSGNEV------LHYTFRPSKQISYATLNKKGI 932
            |:.......||.|    |.||.:..:....::::.::|      |..:..||:| .|        
  Fly  1202 QQPAYGYDPLTHG----GYGAVDDYAPYPHLTATPSQVGDEYHNLRNSQNPSRQ-DY-------- 1253

  Fly   933 TTCSPPLGSLNYSVSTSTP--------TSSYHLT---PQPMEVSLLSPNN---PSVTSSLS---- 979
              ||.|..|:      ..|        .|.||..   |.|..:..|..:.   |....|||    
  Fly  1254 --CSDPYASV------QKPKKRVDQHLDSPYHDVSGLPNPYNMEHLEQDEVLPPQQHMSLSYDDS 1310

  Fly   980 -EYRFRTGP 987
             |..:.|.|
  Fly  1311 FEGEYSTTP 1319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IVNP_001034052.2 V-set 79..188 CDD:284989 14/63 (22%)
IG_like 80..188 CDD:214653 14/63 (22%)
Ig 210..281 CDD:299845 26/161 (16%)
Ig 319..392 CDD:299845 22/81 (27%)
IG_like 319..383 CDD:214653 19/65 (29%)
IG_like 412..489 CDD:214653 23/140 (16%)
IGc2 413..478 CDD:197706 21/128 (16%)
Ig_3 509..572 CDD:290638 19/70 (27%)
fn3 593..675 CDD:278470 20/157 (13%)
edNP_001260013.1 Ig 50..147 CDD:299845 15/64 (23%)
I-set 146..249 CDD:254352 24/109 (22%)
Ig 168..249 CDD:299845 15/80 (19%)
IGc2 268..323 CDD:197706 6/55 (11%)
Ig_3 341..406 CDD:290638 23/77 (30%)
Ig_2 437..514 CDD:290606 6/76 (8%)
I-set 526..633 CDD:254352 17/107 (16%)
Ig 546..632 CDD:143165 17/86 (20%)
IG_like 654..736 CDD:214653 22/84 (26%)
Ig 656..734 CDD:143165 20/80 (25%)
FN3 741..848 CDD:238020 12/106 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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