DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-IV and ed

DIOPT Version :10

Sequence 1:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster
Sequence 2:NP_523469.2 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster


Alignment Length:1310 Identity:241/1310 - (18%)
Similarity:393/1310 - (30%) Gaps:521/1310 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 QFGQARLWSSPTAFGTRAHFSSTTHPAQLKIDNIRI-EDEGVYRCRVDFR--NSPTRNLKINLTV 188
            ||....:.....:.|.|..|........|:|.|:.. .|.|.:.||:..:  .:.......||||
  Fly    82 QFDNVAIGEVQLSSGYRLDFQPERGIYDLQIKNVSYNRDNGRFECRIKAKGTGADVHQEFHNLTV 146

  Fly   189 IVPPDRPVIYGQNRHEKAGNVESFSEGNDIVLSCEVSGGRPRPNVTWY-------LDNTAIDESF 246
            :.||..|||       ..||:...:|...:.|:|...||.|.|.:|||       |..|.:....
  Fly   147 LTPPHPPVI-------SPGNIAVATEDKPMELTCSSIGGSPDPTITWYREGSNTPLPATVLKGGT 204

  Fly   247 EQRP----------------------------DGK------TINHLSYPNVG------------- 264
            :.:|                            :||      |:|...||.|.             
  Fly   205 KDQPTNATLSIIPRREDDGAKYKCVVRNRAMNEGKRLEATATLNVNYYPRVEVGPENPLRVERDR 269

  Fly   265 -----------------RQHLNSRLM--------------------CVASNTNLTPPNNRVVILD 292
                             |.:.|.|.:                    |:|.| .|.....:.:|||
  Fly   270 TAKLECNVDAKPKVPNVRWNRNGRFISSSLVHTIHRVSVQDAGKYTCIADN-GLGKTGEQELILD 333

  Fly   293 VNLKPIAVHILTKDRFVSADRTYDVECKSSGSKPPALITWWKGSKQLKKLTKNFNEPD-NQSLSI 356
            :...|:.| |.:|.|......|..:.|..:.:..|..|.|.|.           |.|| ..:..:
  Fly   334 ILYPPMVV-IESKTREAEEGDTVTIRCNVTANPAPVTIEWLKE-----------NSPDFRYNGDV 386

  Fly   357 LTFTPGREDD-GKYLTCRAENQFIDGSAIEDKWR-------LIVHYQP----------------- 396
            ||.|..|.|. |.|: |||.| .:....:|...|       |:|.::|                 
  Fly   387 LTLTSVRADHAGNYI-CRAVN-IMQSQGMERSERVGNSTVALLVRHRPGQAYITPNKPVVHVGNG 449

  Fly   397 ---------------------------TTTLKI---GSSLNPDDIKEGDDAYFEC---------- 421
                                       ::|.||   |...:......|::..:.|          
  Fly   450 VTLTCSANPPGWPVPQYRWFRDMDGEFSSTQKILAQGPQYSIPKAHLGNEGKYHCHAVNELGIGM 514

  Fly   422 ---IVL--------------------------------ANPKPYKMSWFHNGKEL--QHNISA-- 447
               |||                                ..|.| .:.|..:..|:  :.|:..  
  Fly   515 MATIVLEIHQPPQFLAKLQQHMTRRVADTDYTVTCSAKGKPAP-SVKWLKDAVEILPEENLYEVQ 578

  Fly   448 --------GVILSDQSLVLQSVSRASA-----GD---YTCLAVNSEGKGPSNPVTLRIRYAPICA 496
                    |::.....|..:..:|.:.     ||   ||||..| |....::.:.|||.:.||..
  Fly   579 TNPDQGLNGMVTVQSQLKFRGKARPNGNALVPGDRGLYTCLYQN-EVNSANSSMQLRIEHEPIVL 642

  Fly   497 TDHEELLGALKHETLPLKCEVDSSPPADSFQWTFN--------SSGEQTELPARLHSSETGMSRL 553
            ..:.::...:: ||..:.|:|.:.|..: |||.|.        ||....|:.....:::...|.|
  Fly   643 HQYNKVAFDIR-ETAEVVCKVQAYPKPE-FQWQFGNNPSPLTMSSDGHYEISTTTDNNDIYTSVL 705

  Fly   554 NYTPSTDLDYGTISCWAKNSIGTQKSPCVFQIVAAGRPFPLQNCSVTNQSVDSLQVDCLEGFDGG 618
            .....|..|||..:|...|::.|.::|  .::...|.|....|...|....:.:.:....|||||
  Fly   706 KINSLTHSDYGEYTCRVANTLDTIRAP--IRLQQKGPPEKPTNLRATEVGHNYVSLSWDPGFDGG 768

  Fly   619 LP----------------------------------------------------QGFMLELVELN 631
            |.                                                    |.:..::..||
  Fly   769 LSKTKFFVSYRRVAMPREEQLIPDCATLANSNSAWVEVDCQRDIPCKVTALEQHQSYAFKVKALN 833

  Fly   632 -------------TLRLAR---NITVSHTPVTFVIDNLDQAATYRMVIFAVNAKGRSEP------ 674
                         |.:::|   .:.|::.|.|..: .:|..||...::..|.:...::.      
  Fly   834 PKSDSPYSSEIMVTTKVSRIPPPLQVTYEPNTRTL-GIDVGATCLNLVAVVESMVNADSPMAAWE 897

  Fly   675 --TIIDDINFKG---------VAKFTGA------------------STGL-SMPL---------- 699
              |.:|::...|         :.:..||                  ..|| |:.|          
  Fly   898 VVTTMDNLQLSGNGPTHKEKIIDRIIGARRVGGGRALGHTISEDEDDNGLNSLALEDENSPTVRV 962

  Fly   700 -------------------------------SPFLAGLTLFCGLLFAIFCIMLAAIYRRISNRRS 733
                                           :|.|..:.:.| ::||:|..::....|  ..|..
  Fly   963 KLCLRTNPEHCGDYTDAEIGRPYIAEANALATPTLIAIIVSC-VVFALFAGLILMFCR--CKRNQ 1024

  Fly   734 DSNLKVAKHTQLTIPADCQLDPLHPGV-------------QTDGSGNHQPHHSL-LPLNCDGRNA 784
            ......||        |.::|.:.|.:             ...|..|....||: |.|:.:.:..
  Fly  1025 SKKSAAAK--------DYEMDSVRPSIVAAQQNQAPPPYYPASGLDNKALEHSMDLALSMEDQKT 1081

  Fly   785 V------------DCGALG-DVGGGGVGVGLDGGIK----------GSSPIGLVAMPG---DTLR 823
            .            ..|.:| .:|||.||||:.|.:.          |.|.:|:..:||   .|:.
  Fly  1082 ALYATQNGYSYHPGSGVVGVGMGGGVVGVGVGGSVVSGMGGGVGGIGGSGVGVNGIPGLSAHTMP 1146

  Fly   824 SN-------ARNRHSPMADQADIDDTD--------PDVIPNQYEKRPLKSLVSPPGFASPSNRLM 873
            .|       ..|.:|...:...::..|        ...:.||      :.:|.     :|.|:.:
  Fly  1147 GNEWVNMGYMENNYSNSNNGGSVNSQDSLWQVKMSAAAVGNQ------QGMVQ-----APMNQYV 1200

  Fly   874 -QRDYLRETELTKGGSDVGMGAAEGLSSIGLMSSSGNEV------LHYTFRPSKQISYATLNKKG 931
             |:.......||.|    |.||.:..:....::::.::|      |..:..||:| .|       
  Fly  1201 EQQPAYGYDPLTHG----GYGAVDDYAPYPHLTATPSQVGDEYHNLRNSQNPSRQ-DY------- 1253

  Fly   932 ITTCSPPLGSLNYSVSTSTP--------TSSYHLT---PQPMEVSLLSPNN---PSVTSSLS--- 979
               ||.|..|:      ..|        .|.||..   |.|..:..|..:.   |....|||   
  Fly  1254 ---CSDPYASV------QKPKKRVDQHLDSPYHDVSGLPNPYNMEHLEQDEVLPPQQHMSLSYDD 1309

  Fly   980 --EYRFRTGP 987
              |..:.|.|
  Fly  1310 SFEGEYSTTP 1319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IVNP_001034052.2 V-set 79..188 CDD:462230 14/63 (22%)
Ig 210..281 CDD:472250 26/161 (16%)
Ig strand B 218..222 CDD:409353 1/3 (33%)
Ig strand C 232..236 CDD:409353 1/3 (33%)
Ig <317..392 CDD:472250 22/83 (27%)
Ig strand C 329..333 CDD:409353 1/3 (33%)
Ig strand E 355..359 CDD:409353 1/3 (33%)
Ig strand F 369..374 CDD:409353 2/4 (50%)
Ig strand G 385..388 CDD:409353 1/2 (50%)
Ig 411..479 CDD:472250 21/132 (16%)
Ig strand B 417..421 CDD:409353 0/3 (0%)
Ig strand C 431..435 CDD:409353 0/3 (0%)
Ig strand E 454..458 CDD:409353 1/3 (33%)
Ig strand F 468..473 CDD:409353 4/7 (57%)
Ig 494..576 CDD:472250 21/89 (24%)
Ig strand B 511..515 CDD:409353 0/3 (0%)
Ig strand C 525..529 CDD:409353 2/3 (67%)
Ig strand E 551..555 CDD:409353 2/3 (67%)
Ig strand F 566..570 CDD:409353 1/3 (33%)
fn3 593..675 CDD:394996 20/157 (13%)
edNP_523469.2 V-set 50..147 CDD:462230 15/64 (23%)
Ig 153..249 CDD:472250 21/102 (21%)
Ig strand B 169..173 CDD:409353 1/3 (33%)
Ig strand C 183..187 CDD:409353 1/3 (33%)
Ig strand E 211..215 CDD:409353 0/3 (0%)
Ig strand F 225..230 CDD:409353 0/4 (0%)
Ig strand G 242..245 CDD:409353 0/2 (0%)
Ig_3 253..320 CDD:464046 7/66 (11%)
Ig_3 337..406 CDD:464046 24/81 (30%)
Ig_2 437..>504 CDD:464026 5/66 (8%)
Ig 525..635 CDD:472250 17/111 (15%)
Ig strand B 545..549 CDD:409568 0/3 (0%)
Ig strand C 558..562 CDD:409568 0/3 (0%)
Ig strand E 587..591 CDD:409568 1/3 (33%)
Ig strand F 615..620 CDD:409568 3/4 (75%)
Ig strand G 628..631 CDD:409568 0/2 (0%)
Ig_3 639..724 CDD:464046 21/86 (24%)
FN3 741..848 CDD:238020 12/106 (11%)

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