DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-IV and Siglec5

DIOPT Version :9

Sequence 1:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_006229008.1 Gene:Siglec5 / 292843 RGDID:1305432 Length:569 Species:Rattus norvegicus


Alignment Length:695 Identity:153/695 - (22%)
Similarity:232/695 - (33%) Gaps:263/695 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VWRQLLLPLLMLSGISQVCSTYVEQDELMQNLDRPVPLTTVQGVLGRQAMLPCDISPQERDDAVY 105
            :|.| |||||....::      ||..||  :|...|   |||.  |....:||.:.......:|:
  Rat     2 LWAQ-LLPLLWAGSLA------VENYEL--SLTESV---TVQE--GLCVFVPCQVKYPASGGSVF 52

  Fly   106 MVLWFREGD----GEPIYNFDVRGRQFGQARLWSSPTAFGTRAHF----SSTTHPAQLKIDNIRI 162
             ..||::|.    ..|:...|..           .|....|:..|    ...|....|.|.:.|.
  Rat    53 -GYWFQDGANTNLNSPVATNDPH-----------RPVQQETQGRFYLVGGIDTKNCSLDIRDARK 105

  Fly   163 EDEGVYRCRVD------FRN----------SPTRNLKINLTVIVPPDRPVIYGQNRHEKAGNVES 211
            .|.|.|..|:|      |||          :.|.||::..|::......||.             
  Rat   106 SDTGKYFFRLDGSVKYSFRNRMLSVHVTALTKTPNLQVTSTLVSGTSTRVIC------------- 157

  Fly   212 FSEGNDIVLSCEVSGGRPRPNVTWYLDNTAIDESFEQRPDGKTINHLSYPNVGRQHLNSRLMCVA 276
                 .::.:||  .|.| |..:|.  ::|:                  .::||:.:      ::
  Rat   158 -----SVLWACE--QGTP-PIFSWM--SSAL------------------TSLGRRTI------LS 188

  Fly   277 SNTNLTP---PNNRVVILDVNLKPIAVHILTKDRFVSADRTYDVECKSSGSKPPALITWWKGSKQ 338
            |..||||   .|...:|..|......         |:.:||                        
  Rat   189 SELNLTPRPQDNGTNLICQVTFPGAG---------VTVERT------------------------ 220

  Fly   339 LKKLTKNFNEPDNQSLSILTFTPGREDDGKYLTCRAENQFIDGSAIEDKWRLIVHYQPTTTLKIG 403
                         |.||: |:.|.:      ||.|.  .:.||:             .|..|:.|
  Rat   221 -------------QQLSV-TYAPQK------LTIRV--SWGDGT-------------ETKVLQSG 250

  Fly   404 SSLNPDDIKEGDDAYFECIVLANPKPYKMSWFHNGKELQHN--ISAGVILSDQSLVLQSVSRASA 466
            :||   .|:||:.....|:..:||.. .:||   .::.|.|  :|.|     ..|.|..|.....
  Rat   251 ASL---QIQEGESLRLVCVADSNPSA-MLSW---KRQTQKNFRLSKG-----DELQLPRVELEDQ 303

  Fly   467 GDYTCLAVNSEGKGPSNPVTLRIR-----YAPICATDHEELLGALKHETLPLKCEVDSSP-PADS 525
            |.|.|.|.||.|...:: |:|.||     .||.|:.|.|           .|.|...|.. ||.|
  Rat   304 GKYICQAKNSLGTQTAS-VSLSIRSLLQLLAPSCSWDSE-----------GLHCSCSSRAWPAPS 356

  Fly   526 FQWTFNS---SGEQTELPARLHSSETGMSRLNYTPSTDLDYGT---ISCWAKNSIGTQKSPCVFQ 584
            ..|....   .|..:.....:.||..| ..:|.:.|..:::.|   :||.|.|..|.|::..|. 
  Rat   357 LGWRLGEGLLEGNSSNASFTVMSSSAG-PWVNSSLSLSVEFSTDHRLSCEAWNDYGVQRATIVL- 419

  Fly   585 IVAAGRPFPLQNCSVTNQSVDSLQVDCLEGFDGGLPQGFM------------------------- 624
                   .|.|..|..::|..|          ||..||.:                         
  Rat   420 -------VPGQGVSQADKSETS----------GGAVQGAIWGAGLMALLAVSFCLIFFIVKFLRK 467

  Fly   625 ---LELVELNTLRLARNI--TV-------SHTPVTFVI-DNLDQA 656
               ||:..:....||:|:  |:       |:.|:.:.| |:|:::
  Rat   468 KSALEVAAMEGNHLAKNLVSTINSASMISSNIPLRYPIQDHLNES 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IVNP_001034052.2 V-set 79..188 CDD:284989 30/132 (23%)
IG_like 80..188 CDD:214653 30/131 (23%)
Ig 210..281 CDD:299845 10/70 (14%)
Ig 319..392 CDD:299845 10/72 (14%)
IG_like 319..383 CDD:214653 10/63 (16%)
IG_like 412..489 CDD:214653 23/78 (29%)
IGc2 413..478 CDD:197706 20/66 (30%)
Ig_3 509..572 CDD:290638 17/69 (25%)
fn3 593..675 CDD:278470 20/102 (20%)
Siglec5XP_006229008.1 Ig 20..133 CDD:299845 31/131 (24%)
IG_like 26..130 CDD:214653 28/120 (23%)
Ig <163..228 CDD:299845 24/140 (17%)
IG_like 252..325 CDD:214653 26/85 (31%)
IGc2 257..315 CDD:197706 20/66 (30%)
Ig <347..419 CDD:299845 18/72 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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