| Sequence 1: | NP_001034052.2 | Gene: | side-IV / 41657 | FlyBaseID: | FBgn0038156 | Length: | 1001 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038944117.1 | Gene: | Nectin3 / 288124 | RGDID: | 1309516 | Length: | 584 | Species: | Rattus norvegicus |
| Alignment Length: | 534 | Identity: | 116/534 - (21%) |
|---|---|---|---|
| Similarity: | 180/534 - (33%) | Gaps: | 129/534 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 28 KKPTAPHPFPSPNVWRQLLLPLLMLSGISQ------VCSTYVEQDELMQNLDRPVPLTTVQGVLG 86
Fly 87 RQAMLPCDISPQERDDAVYMVLWFR-EGDG-------EPIYNFDVRGRQFGQARLWSSPTAFGTR 143
Fly 144 AHFSS-TTHPAQLKIDNIRIEDEGVYRCR-VDFRNSPTRNLK--INLTVIVPPDRPVIYGQNRHE 204
Fly 205 KAGNVESFSEGNDIVLSCEVSGGRPRPNVTWYLDNTAIDESFEQRPDGKTINHLS----YPNVGR 265
Fly 266 QHLNSRLMCVASNTNLTPPNNRVVILDVNLKP-IAVHILTKDRFVSADRTYDVECKSSGSKPPAL 329
Fly 330 ITW------WKGSKQLKKLTKNFNEPDNQSLSILTFTPGREDDGKYLTCRAENQFIDGSAIEDKW 388
Fly 389 RLIVHYQPTTTLKIGSSLNPDDIKEGDDAYFECIVLANPK-PYKMSWFHNGK-ELQHNISAGVIL 451
Fly 452 SDQSLVLQSV---------SRASAGDYTCLAVNSEGKGPSNPVTLRIRYAPICATDHEELLGALK 507
Fly 508 HETLPLKCEVDSSP 521 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| side-IV | NP_001034052.2 | V-set | 79..188 | CDD:462230 | 28/120 (23%) |
| Ig | 210..281 | CDD:472250 | 13/74 (18%) | ||
| Ig strand B | 218..222 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 232..236 | CDD:409353 | 0/3 (0%) | ||
| Ig | <317..392 | CDD:472250 | 17/80 (21%) | ||
| Ig strand C | 329..333 | CDD:409353 | 1/9 (11%) | ||
| Ig strand E | 355..359 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 369..374 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 385..388 | CDD:409353 | 1/2 (50%) | ||
| Ig | 411..479 | CDD:472250 | 17/78 (22%) | ||
| Ig strand B | 417..421 | CDD:409353 | 1/3 (33%) | ||
| Ig strand C | 431..435 | CDD:409353 | 1/3 (33%) | ||
| Ig strand E | 454..458 | CDD:409353 | 0/3 (0%) | ||
| Ig strand F | 468..473 | CDD:409353 | 2/4 (50%) | ||
| Ig | 494..576 | CDD:472250 | 7/28 (25%) | ||
| Ig strand B | 511..515 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 525..529 | CDD:409353 | |||
| Ig strand E | 551..555 | CDD:409353 | |||
| Ig strand F | 566..570 | CDD:409353 | |||
| fn3 | 593..675 | CDD:394996 | |||
| Nectin3 | XP_038944117.1 | IgV_1_Nectin-3_like | 93..202 | CDD:409470 | 32/141 (23%) |
| FR1 | 93..116 | CDD:409470 | 9/39 (23%) | ||
| Ig strand A | 93..97 | CDD:409470 | 1/3 (33%) | ||
| Ig strand A' | 99..103 | CDD:409470 | 1/17 (6%) | ||
| Ig strand B | 108..116 | CDD:409470 | 3/10 (30%) | ||
| CDR1 | 117..121 | CDD:409470 | 0/3 (0%) | ||
| FR2 | 122..128 | CDD:409470 | 1/5 (20%) | ||
| Ig strand C | 123..128 | CDD:409470 | 1/4 (25%) | ||
| CDR2 | 129..148 | CDD:409470 | 4/18 (22%) | ||
| Ig strand C' | 138..143 | CDD:409470 | 0/4 (0%) | ||
| Ig strand C' | 145..149 | CDD:409470 | 1/3 (33%) | ||
| FR3 | 149..187 | CDD:409470 | 11/50 (22%) | ||
| Ig strand D | 156..160 | CDD:409470 | 1/3 (33%) | ||
| Ig strand E | 165..172 | CDD:409470 | 1/6 (17%) | ||
| Ig strand F | 179..187 | CDD:409470 | 3/7 (43%) | ||
| CDR3 | 188..191 | CDD:409470 | 2/5 (40%) | ||
| Ig strand G | 191..201 | CDD:409470 | 1/9 (11%) | ||
| FR4 | 192..202 | CDD:409470 | 2/9 (22%) | ||
| IgC1_2_Nectin-3-4_like | 205..300 | CDD:409501 | 20/104 (19%) | ||
| Ig strand A | 205..211 | CDD:409501 | 1/5 (20%) | ||
| Ig strand B | 224..231 | CDD:409501 | 1/6 (17%) | ||
| Ig strand C | 236..242 | CDD:409501 | 0/5 (0%) | ||
| Ig strand C' | 244..246 | CDD:409501 | 1/1 (100%) | ||
| Ig strand D | 248..255 | CDD:409501 | 0/6 (0%) | ||
| Ig strand E | 260..268 | CDD:409501 | 1/7 (14%) | ||
| Ig strand F | 278..285 | CDD:409501 | 3/6 (50%) | ||
| Ig strand G | 291..297 | CDD:409501 | 0/5 (0%) | ||
| Ig | 304..390 | CDD:472250 | 21/101 (21%) | ||
| Ig strand B | 322..326 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 336..340 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 355..360 | CDD:409353 | 1/4 (25%) | ||
| Ig strand F | 370..375 | CDD:409353 | 2/5 (40%) | ||
| Ig strand G | 385..388 | CDD:409353 | 0/2 (0%) | ||
| TM_EGFR-like | 438..467 | CDD:213052 | 6/28 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||