Protein Alignment side-IV and Skint3

DIOPT Version :10

• Sequence 1: NP_001034052.2
• Gene: side-IV / 41657
• FlyBaseID: FBgn0038156
• Length: 1001
• Species: Drosophila melanogaster
• Sequence 2: NP_001095944.1
• Gene: Skint3 / 195564
• MGIID: 3045331
• Length: 458
• Species: Mus musculus
• Alignment Length: 290
• Identity: 61/290 - (21%)
• Similarity: 103/290 - (35%)
• Gaps: 94/290 - (32%)

  Fly    46 LLPLLMLSGISQVCSTYVEQDELMQNLDRPVPLTTVQGVLGRQAMLPCDISPQERDDAVYM-VLW 109
            :|.:|:||          .:...:..|:||| |..:.|:|    .|.|.:||.:  :|..| :.|
Mouse    17 VLQMLVLS----------SEQFTITGLERPV-LAPLGGIL----ELSCQLSPPQ--NAQQMEIRW 64

  Fly   110 FREGDGEPIYNF----DVRGRQFGQARLWSSPTAFGTRAHFSSTTH---------PAQLKIDNIR 161
            ||....||:|.:    |:.|.               |.:.:...|.         ...|::..:.
Mouse    65 FRNRYTEPVYLYRNGKDLHGE---------------TISKYVERTELLKHDIGKGKVTLRVFKVT 114

  Fly   162 IEDEGVYRCRVD---FRNSPTRNLKINLT-----VIVPPDRPVIYGQNRHEKAGNVESFSEGNDI 218
            ::|:|.|.|...   |.......:|:..|     :|:.|  |.|.|                  :
Mouse   115 VDDDGSYHCVFKDGIFYEEHITEVKVTATSSDIKIIMHP--PNIKG------------------V 159

  Fly   219 VLSCEVSGGRPRPNVTWYLDNTAI---DESFEQRPDGKTINHLS--YPNVGRQHLNSRLMCVASN 278
            :|.|...|..|:|::.|...|..:   ....:.:.:.|..|...  :.:||   |:..:.|...|
Mouse   160 MLECHSRGWFPQPHMEWRDSNGQVIPATSKSQSQDENKLFNMTMNLFADVG---LHQIVTCYIQN 221

  Fly   279 TNLTPPNNRVVILDVNLKPIAVHILTKDRF 308
            . ||.....:.|           :||.|.|
Mouse   222 L-LTHQEESISI-----------VLTGDLF 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
side-IV	NP_001034052.2	V-set	79..188	CDD:462230	26/130 (20%)
		Ig	210..281	CDD:472250	14/75 (19%)
		Ig strand B	218..222	CDD:409353	1/3 (33%)
		Ig strand C	232..236	CDD:409353	0/3 (0%)
		Ig	<317..392	CDD:472250
		Ig strand C	329..333	CDD:409353
		Ig strand E	355..359	CDD:409353
		Ig strand F	369..374	CDD:409353
		Ig strand G	385..388	CDD:409353
		Ig	411..479	CDD:472250
		Ig strand B	417..421	CDD:409353
		Ig strand C	431..435	CDD:409353
		Ig strand E	454..458	CDD:409353
		Ig strand F	468..473	CDD:409353
		Ig	494..576	CDD:472250
		Ig strand B	511..515	CDD:409353
		Ig strand C	525..529	CDD:409353
		Ig strand E	551..555	CDD:409353
		Ig strand F	566..570	CDD:409353
		fn3	593..675	CDD:394996
Skint3	NP_001095944.1	Ig	28..141	CDD:472250	30/134 (22%)
		Ig strand B	45..49	CDD:409353	2/7 (29%)
		Ig strand C	61..65	CDD:409353	0/3 (0%)
		Ig strand E	106..110	CDD:409353	1/3 (33%)
		Ig strand F	120..125	CDD:409353	2/4 (50%)
		Ig	130..220	CDD:472250	21/112 (19%)
		Ig strand G	133..136	CDD:409353	0/2 (0%)
		Ig strand B	148..163	CDD:409353	6/34 (18%)
		Ig strand C	173..177	CDD:409353	0/3 (0%)
		Ig strand F	213..219	CDD:409353	1/5 (20%)