| Sequence 1: | NP_001034052.2 | Gene: | side-IV / 41657 | FlyBaseID: | FBgn0038156 | Length: | 1001 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001093946.1 | Gene: | Nectin1 / 192183 | RGDID: | 620791 | Length: | 515 | Species: | Rattus norvegicus |
| Alignment Length: | 449 | Identity: | 80/449 - (17%) |
|---|---|---|---|
| Similarity: | 142/449 - (31%) | Gaps: | 157/449 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 80 TVQGVLGRQAMLPCDISPQERDDAVYMVLWFREGDGE----PIYNFDVRGRQFGQARLWSSPT-- 138
Fly 139 -----AFGTRAHFSSTTH-PAQLKIDNIRIEDEGVYRCRVDFRNSPT--RNLKINLTVIVPPDRP 195
Fly 196 VIYGQNRHEKAGNVESFSEGNDIVLSCEVSGGRPRPNVTWYLDNTAIDESFEQRPDGKTINHLSY 260
Fly 261 PNVGRQHLNSRLMCVASNTNLTPPNNRVVILDVNLKPIAVHILTKDRFVSADRTYDVECKSSGSK 325
Fly 326 PPALITW---WKGSKQLKKLTKNFNEPDNQSLSILT---FTPGREDDGKYLTCRAENQFIDGSAI 384
Fly 385 EDKWRLIVHYQPTTTLKIGSSLNPDDIKEGDDAYFECIVLANPKPYKMSWFHNGKELQHNISAGV 449
Fly 450 ILSDQSLVLQS-VSRASAGDYTCLAVNSEGKGPSNPVTLRIRYAPICAT-DHEELLGAL 506 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| side-IV | NP_001034052.2 | V-set | 79..188 | CDD:462230 | 26/121 (21%) |
| Ig | 210..281 | CDD:472250 | 4/70 (6%) | ||
| Ig strand B | 218..222 | CDD:409353 | 2/3 (67%) | ||
| Ig strand C | 232..236 | CDD:409353 | 0/3 (0%) | ||
| Ig | <317..392 | CDD:472250 | 17/80 (21%) | ||
| Ig strand C | 329..333 | CDD:409353 | 1/6 (17%) | ||
| Ig strand E | 355..359 | CDD:409353 | 0/6 (0%) | ||
| Ig strand F | 369..374 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 385..388 | CDD:409353 | 0/2 (0%) | ||
| Ig | 411..479 | CDD:472250 | 16/68 (24%) | ||
| Ig strand B | 417..421 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 431..435 | CDD:409353 | 0/3 (0%) | ||
| Ig strand E | 454..458 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 468..473 | CDD:409353 | 2/4 (50%) | ||
| Ig | 494..576 | CDD:472250 | 3/14 (21%) | ||
| Ig strand B | 511..515 | CDD:409353 | |||
| Ig strand C | 525..529 | CDD:409353 | |||
| Ig strand E | 551..555 | CDD:409353 | |||
| Ig strand F | 566..570 | CDD:409353 | |||
| fn3 | 593..675 | CDD:394996 | |||
| Nectin1 | NP_001093946.1 | IgV_1_Nectin-1_like | 31..143 | CDD:409469 | 27/122 (22%) |
| FR1 | 31..54 | CDD:409469 | 4/15 (27%) | ||
| Ig strand A | 31..35 | CDD:409469 | |||
| Ig strand A' | 37..41 | CDD:409469 | 0/2 (0%) | ||
| Ig strand B | 46..54 | CDD:409469 | 2/7 (29%) | ||
| CDR1 | 55..62 | CDD:409469 | 0/6 (0%) | ||
| FR2 | 63..69 | CDD:409469 | 2/5 (40%) | ||
| Ig strand C | 64..69 | CDD:409469 | 2/4 (50%) | ||
| CDR2 | 70..89 | CDD:409469 | 6/34 (18%) | ||
| Ig strand C' | 79..84 | CDD:409469 | 3/20 (15%) | ||
| Ig strand C' | 86..90 | CDD:409469 | 0/3 (0%) | ||
| FR3 | 90..128 | CDD:409469 | 9/39 (23%) | ||
| Ig strand D | 97..101 | CDD:409469 | 1/3 (33%) | ||
| Ig strand E | 106..113 | CDD:409469 | 0/6 (0%) | ||
| Ig strand F | 120..128 | CDD:409469 | 4/9 (44%) | ||
| CDR3 | 129..132 | CDD:409469 | 1/2 (50%) | ||
| Ig strand G | 132..142 | CDD:409469 | 3/9 (33%) | ||
| FR4 | 133..143 | CDD:409469 | 4/9 (44%) | ||
| IgC1_2_Nectin-1_like | 146..243 | CDD:143298 | 24/205 (12%) | ||
| Ig strand A | 146..152 | CDD:143298 | 1/22 (5%) | ||
| Ig strand B | 168..175 | CDD:143298 | 1/6 (17%) | ||
| Ig strand C | 180..186 | CDD:143298 | 1/5 (20%) | ||
| Ig strand C' | 188..190 | CDD:143298 | 0/1 (0%) | ||
| Ig strand D | 191..199 | CDD:143298 | 1/7 (14%) | ||
| Ig strand E | 205..213 | CDD:143298 | 0/7 (0%) | ||
| Ig strand F | 223..230 | CDD:143298 | 2/7 (29%) | ||
| Ig strand G | 234..240 | CDD:143298 | 0/5 (0%) | ||
| Ig | 247..333 | CDD:472250 | 21/93 (23%) | ||
| Ig strand B | 265..269 | CDD:409353 | 0/3 (0%) | ||
| Ig strand C | 279..283 | CDD:409353 | 1/7 (14%) | ||
| Ig strand E | 298..302 | CDD:409353 | 1/3 (33%) | ||
| Ig strand F | 313..318 | CDD:409353 | 2/4 (50%) | ||
| Ig strand G | 330..333 | CDD:409353 | 0/2 (0%) | ||
| TM_EGFR-like | 353..382 | CDD:213052 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||