DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-IV and LOC100148735

DIOPT Version :9

Sequence 1:NP_001034052.2 Gene:side-IV / 41657 FlyBaseID:FBgn0038156 Length:1001 Species:Drosophila melanogaster
Sequence 2:XP_001919202.4 Gene:LOC100148735 / 100148735 -ID:- Length:440 Species:Danio rerio


Alignment Length:412 Identity:101/412 - (24%)
Similarity:156/412 - (37%) Gaps:81/412 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 LPCDISPQERDDAVYMVLWFREGDGEPIYNFDVRGRQFGQARLWSSPTAFGTRAHFSSTTHPAQL 155
            :.|..:....:..:..|.|    :.:.:||    |.:|  |.|...|.......:.........:
Zfish    46 ISCTFTYPNTEYQIMKVFW----NKDQVYN----GVEF--ADLSEDPEYSQRLQYLGDKQQNCTI 100

  Fly   156 KIDNIRIEDEGVY--RCRVDFRNS-----PTRNLKINLTVIVPPDRPVIYGQNRHEKAGNVESFS 213
            ::.::..:|||.|  |...:..|.     |...|.:....:..|:|                 ..
Zfish   101 RLSHVTKKDEGQYYFRFTTNVANQKWT
GIPGVILSVTELQLESPER-----------------VK 148

  Fly   214 EGNDIVLSCEVSGG-RPRPNVTWYLDNTAIDESFEQRPDGKTINHLSYPNVGRQHLNSRLMCVAS 277
            ||:.:.|:|..|.. ...|...||.::    .:.....|...|:.:|..:.||..      |...
Zfish   149 EGDSVRLTCRSSCKLTDTPTFIWYRNS----HTLTNIGDELNISPVSRGDAGRYR------CAVH 203

  Fly   278 NTNLTPPNNRVVILDVNLKP--IAVHILTKDRFVSADRTYDVECKSSGSKPPALITWWKGSKQLK 340
            ...||.|.   |.|:|...|  |:|.|......:|.| :..:.| ||.|.|||.|.|:||...::
Zfish   204 GHTLTSPE---VYLNV
MYPPKSISVSISGSAVIMSGD-SVTLSC-SSDSNPPAEINWYKGKTSVR 263

  Fly   341 KLTKNFNEPDNQSLSILTFTPGREDDGKYLTCRAENQFIDGSAIEDKWRLIVHYQP-TTTLKI-G 403
                        |..||..:....||.....|||.|  ..|....|...|.|.|.| :.::.| |
Zfish   264 ------------SGRILNISKISSDDSGEYKCRARN--AHGEKYSDPVTLDVQYPPRSVSVSISG 314

  Fly   404 SSLNPDDIKEGDDAYFECIVLANPKPYKMSWFHNGKELQHNISAGVILSDQSLVLQSVSRASAGD 468
            |::    |..||.....|...:||.....||| .|:.|   :.:|.|.|     :.::|...:|:
Zfish   315 SAV----IISGDSVTLSCSSDSNPPALNFSWF-KGETL---VGSGRIFS-----ISNISSDDSGE 366

  Fly   469 YTCLAVNSEGKGPSNPVTLRIR 490
            |.|.|.|..|:..|:||||.::
Zfish   367 YKCRAGNVHGEKHSDPVTLDVQ 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-IVNP_001034052.2 V-set 79..188 CDD:284989 18/103 (17%)
IG_like 80..188 CDD:214653 18/103 (17%)
Ig 210..281 CDD:299845 14/71 (20%)
Ig 319..392 CDD:299845 23/72 (32%)
IG_like 319..383 CDD:214653 21/63 (33%)
IG_like 412..489 CDD:214653 25/76 (33%)
IGc2 413..478 CDD:197706 19/64 (30%)
Ig_3 509..572 CDD:290638
fn3 593..675 CDD:278470
LOC100148735XP_001919202.4 Ig 27..127 CDD:299845 16/90 (18%)
IG_like 143..216 CDD:214653 21/102 (21%)
IGc2 149..205 CDD:197706 14/65 (22%)
IG_like 228..301 CDD:214653 25/88 (28%)
Ig_2 232..301 CDD:290606 25/84 (30%)
IG_like 305..387 CDD:214653 30/94 (32%)
Ig_2 321..387 CDD:290606 25/74 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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