Protein Alignment side-IV and nectin1a

DIOPT Version :10

• Sequence 1: NP_001034052.2
• Gene: side-IV / 41657
• FlyBaseID: FBgn0038156
• Length: 1001
• Species: Drosophila melanogaster
• Sequence 2: XP_005161186.2
• Gene: nectin1a / 100136836
• ZFINID: ZDB-GENE-090224-1
• Length: 496
• Species: Danio rerio
• Alignment Length: 351
• Identity: 83/351 - (23%)
• Similarity: 126/351 - (35%)
• Gaps: 83/351 - (23%)

  Fly   182 LKINLTVIVPPDRPVIYGQNRHEKAGNVESFSEGNDIVLSCEVSGGRPR---PNVTWY------- 236
            |::....::..|..::  |....|||.|     |:.:.|.|:.....|.   ..|||.
Zfish     8 LRLMCVFLIGADGQMV--QMESSKAGFV-----GSQVELPCQFVNSNPPVKISQVTWQKLVNGTK 65

  Fly   237 ----LDNTAIDES----FEQRPDGKTINHLSYPNVGRQHLNS---------RLMCVASNTNLT-- 282
                :.|.|:..|    |.:|...|.      |.| ||...|         ||.....:|.:.
Zfish    66 QNVAIANPALGVSVLNPFRERVRFKN------PAV-RQRTPSLEDTTIVFNRLKLTDESTYICEY 123

  Fly   283 ---PPNNR--VVILDVNLKPIAVHILTKDRFVSADRTYDV---ECKSSGSKPPALITWWKGSKQL 339
               |..||  :|.|.|..:|:....|:....|:..:...:   .|.|:..||.::|| |:.....
Zfish   124 TTFPAGNRENMVNLTVFARPMIQMSLSTPSIVAGSKDLKMTVATCVSANGKPASVIT-WETDLDG 187

  Fly   340 KKLTKNFNEPDNQSL--SILTFTPGREDDGKYLTCRAENQFIDGSAIEDKWRLIVHYQPTTTLKI 402
            :..|:..:.||....  |.....|.||...:.|||.        |...|:     .|..:.||.|
Zfish   188 ESNTQEISNPDGTVTVRSDYLVVPSREIHQQLLTCI--------STYNDE-----QYTDSVTLNI 239

  Fly   403 GSSLNPDDIKEG---------DDAYFECIVLANPKPYKMSWFHNGKELQHNISAGVILSDQSLVL 458
              ...|:.|.||         ::....|:..|||......|    :.|...:.:...|.|..|:.
Zfish   240 --QYEPEVIIEGFDGNWYLNRENVQLTCLADANPTISLYQW----RYLNGTLPSSAELRDDVLIF 298

  Fly   459 QS-VSRASAGDYTCLAVNSEGKGPSN 483
            :. |:...||.|.|.|.||.|.|.::
Zfish   299 KGPVTYDIAGTYVCDATNSIGSGSAS 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
side-IV	NP_001034052.2	V-set	79..188	CDD:462230	1/5 (20%)
		Ig	210..281	CDD:472250	21/97 (22%)
		Ig strand B	218..222	CDD:409353	1/3 (33%)
		Ig strand C	232..236	CDD:409353	2/3 (67%)
		Ig	<317..392	CDD:472250	19/79 (24%)
		Ig strand C	329..333	CDD:409353	2/3 (67%)
		Ig strand E	355..359	CDD:409353	1/3 (33%)
		Ig strand F	369..374	CDD:409353	3/4 (75%)
		Ig strand G	385..388	CDD:409353	1/2 (50%)
		Ig	411..479	CDD:472250	20/77 (26%)
		Ig strand B	417..421	CDD:409353	0/3 (0%)
		Ig strand C	431..435	CDD:409353	0/3 (0%)
		Ig strand E	454..458	CDD:409353	1/3 (33%)
		Ig strand F	468..473	CDD:409353	2/4 (50%)
		Ig	494..576	CDD:472250
		Ig strand B	511..515	CDD:409353
		Ig strand C	525..529	CDD:409353
		Ig strand E	551..555	CDD:409353
		Ig strand F	566..570	CDD:409353
		fn3	593..675	CDD:394996
nectin1a	XP_005161186.2	None