DRSC/TRiP Functional Genomics Resources

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Protein Alignment yrt and frmd7

DIOPT Version :10

Sequence 1:NP_650291.1 Gene:yrt / 41656 FlyBaseID:FBgn0004049 Length:972 Species:Drosophila melanogaster
Sequence 2:XP_017952463.2 Gene:frmd7 / 779686 XenbaseID:XB-GENE-6041331 Length:710 Species:Xenopus tropicalis


Alignment Length:748 Identity:188/748 - (25%)
Similarity:292/748 - (39%) Gaps:241/748 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 RVILLDNTDLSIELSKKALGSFLYEQVFYALDIIEKDYFGLQFMDANHVKHWLDPTKPIKKQVKI 125
            :|..||::..:..:.:||.|..|:......|::.||:||||:|.:....:.||...|||.||||.
 Frog     5 KVQFLDDSQKTFVVDQKAPGKELFNMSCSHLNLTEKEYFGLEFRNHAGCQMWLGLLKPITKQVKH 69

  Fly   126 GPPYTFRLKVKFYSSEPNTLREELTRYLFFLQLKQDLLEGRLDCPEDKATELCALALQSELGDYD 190
            .....|:..|||:..:|..|:.|||||||.||:|::|..|:|.|.::.|..:.:..|||||||::
 Frog    70 PKETIFKFMVKFFLVDPGLLKGELTRYLFALQIKKNLASGKLPCNDNSAALMASYVLQSELGDFE 134

  Fly   191 NQEHSAATVSEFRFVPEQTEDLEIAILDEYKTCRGLTPAQAETAFLNKAKWLDMYGVDMHTVLGK 255
             ::.:...:.:.:::|.| |.|:..||..|:...|.:||:::...|:.|:.||.||:..|.....
 Frog   135 -EDTARKHLEQNQYLPNQ-EYLDNKILKYYQRHVGKSPAESDMQLLDIARKLDTYGIRPHAASDG 197

  Fly   256 DGCEYHLGLTPTGILVFERDQKIGLFFWPKISKLDFKKKKLTLIVIEDDDEGREQEH-------T 313
            :|.:.:|.:...|:||...:.||..|.|..|.||.||:|...:         :...|       |
 Frog   198 EGMQINLAVAHMGVLVLRGNTKINTFNWANIRKLSFKRKHFLI---------KLHPHIDTLCKDT 253

  Fly   314 FVFRLYNEKACKHLWKCAVEHHTFFRL-RAPVKGPSARQNFFRMGSRFRYSGRTE---FQTTQQS 374
            .||.:.:..|||..||..||:|.|||| ..|.:.|  :......||.|||||||:   |.:..:.
 Frog   254 LVFTMESRDACKAFWKSCVEYHAFFRLSEEPKRKP--KPFLCSKGSNFRYSGRTQKQIFDSWTKG 316

  Fly   375 RARRTVQFERRPSQRFASRQSHL---LRERQKASQEAAVSAVA--------------------SV 416
            .: :.:.||||          ||   |.|||..|....::.||                    ||
 Frog   317 NS-KNLPFERR----------HLLANLHERQCRSSPDLLTEVAKQPNDFKLIYTSRPCSRSANSV 370

  Fly   417 --------NARAAAAAAAAAA-------SQSP-----------------------AP-------- 435
                    |.|.:|.....:|       ::.|                       ||        
 Frog   371 GWDPPMHKNRRKSATEIIFSADLERSKPNEEPTILQLSKSSCSFPGCSYLDIKDNAPRTGYNKRP 435

  Fly   436 ------------------------ATPLVSS----QVSTPTPNNDNNNDAFDSLISTD------- 465
                                    |.||.|:    :|..|..::..|:|:.|.|..:|       
 Frog   436 LSYYEDSKYFSGNFKSMSEGCMRDAAPLPSAIYTDRVPLPHSSHQLNSDSVDYLCYSDHLSSIPQ 500

  Fly   466 -------QFITVTPSPSVLTVIQNSAIIEPDA--------------ACSGSISSSSQAAANFA-- 507
                   :.:.:|..||  |.::.||...|.|              :|..|||...:..:...  
 Frog   501 QTSAIVEEIVRLTNKPS--TFLEKSANRSPSARRIKEYHQPVYPRTSCRSSISMVPKRESQVTHV 563

  Fly   508 ----------SLGRNSLKSNFSNEDPAYSKIGSIG------KASGLTVK------------LDPD 544
                      ||..:.:||::.   |..|:...:|      |.|.::.:            |.|.
 Frog   564 EYTQDPYPKRSLSHSDMKSSWF---PCGSEFRPLGPCPILSKTSSISTRPLVPQHLPIPHQLPPP 625

  Fly   545 YTPPYSP-------------------NATKNFD-ET---NPFRNATSSHHGSFGKASISSGQLSV 586
            ..||.:|                   :.|::.| ||   ||:      ::..|||......::.:
 Frog   626 PPPPPAPPLPLTETKKVPRTTERYVYSGTESSDSETEIINPY------YYALFGKHRSPLTRIRL 684

  Fly   587 KSGLSDKDRELDSLLKSIVKDPSPSVLANEAIN 619
            .||....|.|                 .|.|||
 Frog   685 SSGSLQLDEE-----------------ENNAIN 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yrtNP_650291.1 B41 60..250 CDD:214604 68/188 (36%)
FERM_C_NBL4_NBL5 246..339 CDD:270007 30/99 (30%)
FA 352..393 CDD:462582 14/43 (33%)
PHA03255 771..>924 CDD:165513
frmd7XP_017952463.2 FERM_F1_FRMD7 1..86 CDD:340708 28/80 (35%)
FERM_B-lobe 94..184 CDD:271216 32/91 (35%)
FERM_C_FARP1-like 179..299 CDD:270014 41/130 (32%)
FA 294..327 CDD:462582 14/43 (33%)
Blue background indicates that the domain is not in the aligned region.

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