DRSC/TRiP Functional Genomics Resources

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Protein Alignment yrt and epb41l3

DIOPT Version :10

Sequence 1:NP_650291.1 Gene:yrt / 41656 FlyBaseID:FBgn0004049 Length:972 Species:Drosophila melanogaster
Sequence 2:XP_017950527.2 Gene:epb41l3 / 613048 XenbaseID:XB-GENE-1006073 Length:1407 Species:Xenopus tropicalis


Alignment Length:1193 Identity:291/1193 - (24%)
Similarity:451/1193 - (37%) Gaps:323/1193 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GSSQI--KPQRIVVNKNKIDCRVILLDNTDLSIELSKKALGSFLYEQVFYALDIIEKDYFGLQFM 104
            |||::  .|.:.......:..:|:|||.::.|.|:.|::.|..|:|:|...|:::|||||||.:.
 Frog    92 GSSKLSKSPLKSARRPKNMQAKVMLLDGSEYSCEVEKRSKGQILFEKVCEHLNLLEKDYFGLVYR 156

  Fly   105 DANHVKHWLDPTKPIKKQVKIGPPYTFRLKVKFYSSEPNTLREELTRYLFFLQLKQDLLEGRLDC 169
            |:.:.|:||||.|.||||.:.| .:.|...||||..:|:.|.|::|||...|||:.|::.|||.|
 Frog   157 DSENQKNWLDPAKEIKKQTRNG-AWHFSFNVKFYPPDPSQLSEDITRYYLCLQLRDDIVCGRLPC 220

  Fly   170 PEDKATELCALALQSELGDYDNQEHSAATVSEFRFVPEQTEDLEIAILDEYKTCRGLTPAQAETA 234
            .......|.:.::||||||||.:|:.:..|:||||.|.||::||..:::.:|:.||:|||:||..
 Frog   221 SFVTLALLGSYSVQSELGDYDPEEYGSDYVTEFRFAPNQTKELEDKVVELHKSYRGMTPAEAEMH 285

  Fly   235 FLNKAKWLDMYGVDMHTVLGKDGCEYHLGLTPTGILVFERDQKIGLFFWPKISKLDFKKKKLTLI 299
            ||..||.|.|||||:|.....:|.|..||:..:|:|::....:|..|.|||:.|:.:|:....:.
 Frog   286 FLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIK 350

  Fly   300 VIEDDDEGREQEHTFVFRLYNEKACKHLWKCAVEHHTFFRLRAPVKGPSARQNFFRMGSRFRYSG 364
            :...:.|  :.|.|..|:|.|.:|.|.|||..|||||||||..|...|   :.|..:||:|||||
 Frog   351 IRPGEFE--QFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLMPEAPP---KKFLTLGSKFRYSG 410

  Fly   365 RTEFQTTQQSRA--RRTVQFERRPSQRFASRQS---HLLRERQKASQEAAVSAVASVNARAAAAA 424
            ||:.||.:.|..  |....|||..|:|:...:|   ..:.|......:.:||| ..|.......|
 Frog   411 RTQAQTRRASALIDRPAPYFERSSSKRYTMSRSLDGASVNENHDLYMKDSVSA-TEVGTGPYITA 474

  Fly   425 AAAAASQSPAPATPLVSSQ----------------VSTPTPNNDNNNDAFDSLISTDQFITVT-- 471
            ...:.:......||...::                .:..|..:|.....||    ||.|.:.:  
 Frog   475 KGISQTNLITTVTPEKKAEEERDEEEEKKKKVEIITTVTTIRHDTKPSCFD----TDSFHSPSHP 535

  Fly   472 -PSPSV--------------------LTVIQNSAIIEP--DAACSG---------SISSSSQAAA 504
             .|||.                    |:...|....||  |:.|.|         :||...||  
 Frog   536 HSSPSASSTKLRRRCKENARKAVGRELSKDVNEMSHEPERDSDCKGTLYPEEDELAISYKQQA-- 598

  Fly   505 NFASLGRNSLKSNFS----------NEDPAYSKIGSIGKASGLTVKLDPDYTPPYSPNATKNF-- 557
                 ||.....:||          .:|..|....:|.:.:.|...|. .|.|..||:....|  
 Frog   599 -----GRGGTLFSFSLHLPDSFPSLLDDDGYLSFPNISETNFLPESLQ-HYLPIRSPSLVPCFLF 657

  Fly   558 -------------------------------------------------DETNPFRNATSSHHGS 573
                                                             |||:..:..|:     
 Frog   658 IFFFLLSASFSVPYALTLSFPLAMCLCYLEPKAVSLSAALDNDLSDSSDDETDSEQTDTA----- 717

  Fly   574 FGKASISSGQLSVKSGLSDKDRELDSLLK---SIVK-------------------DPSPSVLANE 616
                  :.|:.:.    ::.|:|.|:..|   |::|                   |.:...|...
 Frog   718 ------ADGETTA----TESDQEEDTYAKTQNSLIKRIKGENVYVKHSNLMLEEFDRNQEELMKH 772

  Fly   617 AINDANSIRVTINKTFDMDHNTETLKRLSNA-------------------------NEKPNNQVK 656
            ..|.:...|..:..:.|.....|..||||.:                         .||...|:.
 Frog   773 QTNISELKRTFLETSTDTTTGGEWEKRLSTSPVRLVMRHEEAPMIEPLVPEETKEEREKREIQMS 837

  Fly   657 LANVNTTAL--PPGNIKCNILKARVEEELGAGGNAKLTNQMFVPAAH------------------ 701
            |...:.:.|  .||:|...:.:||....:..  :.::..|..:|.:.                  
 Frog   838 LERTSYSMLESQPGDIVKKLREARATSPVAT--SQQIIMQKTIPTSPEGTEDWVIIDKVPTKVVD 900

  Fly   702 --------------SSNMHTSNTNSS----------NNHAHSDGPDS------LNATYISVGGDK 736
                          ||:|......:|          .....|...||      |..:|.:|.|..
 Frog   901 GETKTIVTYKVTTVSSDMPAGTFKTSPLGGQSLDALKMELKSKEEDSKLKMYTLGRSYDTVSGKV 965

  Fly   737 LTLSI------PEQKPSTGSSSSSSTSSTATT--TTNGNGPYSNATFVS---GFSAPLTPP---- 786
            :|::.      .|:.||:...........|.|  ...|.|.|.....:|   |...|..||    
 Frog   966 VTMTSKAKEGDKEKTPSSFEIIQKLEKDIAETIKIAPGTGDYEILEPISDDKGRKVPEGPPVKRR 1030

  Fly   787 -----SSLPANLNNTGSGCNTTLTSVTTISTPSSPTATVSTTASESV---------APALSNASA 837
                 :.:..:.:...|....||..|....|..:...:|....:|..         .|:..:...
 Frog  1031 MSETLTPIKESDSQLASPVEETLKKVQDKDTEKNLIESVIFGKAEQFQDYDVIKADVPSWKDKKL 1095

  Fly   838 AE--------------ILINEIFINNIINNNASGSITAETAAKPAGSSTPSAGTLLFSTLSEQER 888
            :|              ..:.|...:.::...:||..|.|      ||...|   ||.||....|.
 Frog  1096 SEWRYTRDQPFTIATAHYVTESSASKVVTKQSSGEKTLE------GSDIYS---LLESTRKPSEF 1151

  Fly   889 L-ESQKTNQQMNQSLNLNQNHSEVDAPPSEKKTPSNYPDSSRIPFPSSSNSKDMVSPWLVSSE-- 950
            | |...|:|...|                :.:|.:.:..||:....:...:|:.|...:||.|  
 Frog  1152 LGEVTSTSQSWAQ----------------KTETTTEWDSSSKGQEDAEQKAKEKVVQGMVSLEES 1200

  Fly   951 -VVSAPKGRESAIIRKSVITTQL 972
             |.|....|::|.:..:||.:.|
 Frog  1201 LVGSVHASRDAAELAGTVIASSL 1223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yrtNP_650291.1 B41 60..250 CDD:214604 88/189 (47%)
FERM_C_NBL4_NBL5 246..339 CDD:270007 34/92 (37%)
FA 352..393 CDD:462582 19/42 (45%)
PHA03255 771..>924 CDD:165513 33/188 (18%)
epb41l3XP_017950527.2 B41 112..301 CDD:214604 88/189 (47%)
FERM_C_4_1_family 296..389 CDD:270005 36/94 (38%)
FA 398..441 CDD:462582 19/42 (45%)
SAB 758..806 CDD:461285 10/47 (21%)
4_1_CTD 1293..1399 CDD:461774
Blue background indicates that the domain is not in the aligned region.

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