DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yrt and si:dkey-178k16.1

DIOPT Version :9

Sequence 1:NP_650291.1 Gene:yrt / 41656 FlyBaseID:FBgn0004049 Length:972 Species:Drosophila melanogaster
Sequence 2:XP_009294955.1 Gene:si:dkey-178k16.1 / 569390 ZFINID:ZDB-GENE-090312-61 Length:1273 Species:Danio rerio


Alignment Length:1008 Identity:263/1008 - (26%)
Similarity:409/1008 - (40%) Gaps:249/1008 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SSQIKPQRIVVNKNK------IDCRVILLDNTDLSIELSKKALGSFLYEQVFYALDIIEKDYFGL 101
            ||:..|.|:..:..|      :..:|:|||.:.....:.|...|..|.:.|...|:::|||||||
Zfish    33 SSEKTPSRMSRSPQKSKRPKTVPVKVLLLDGSAYESGVEKLCKGQVLLDMVCEHLNLLEKDYFGL 97

  Fly   102 QFMDANHVKHWLDPTKPIKKQVKIGPPYTFRLKVKFYSSEPNTLREELTRYLFFLQLKQDLLEGR 166
            .|.|....|:||||:|.||||:::| |:.|...||||..:|:.|.|::|||...|||::|:|.||
Zfish    98 SFSDTECQKNWLDPSKEIKKQIRVG-PWHFSFAVKFYPPDPSQLIEDITRYYLCLQLREDILSGR 161

  Fly   167 LDCPEDKATELCALALQSELGDYDNQEHSAATVSEFRFVPEQTEDLEIAILDEYKTCRGLTPAQA 231
            |.|.......|.:.|:|:||||||.:||....::||||.|.||.:||..:::.::|.||::||:|
Zfish   162 LPCSFVTHALLGSYAIQAELGDYDPEEHGPDYINEFRFAPNQTRELEERVMELHRTYRGMSPAEA 226

  Fly   232 ETAFLNKAKWLDMYGVDMHTVLGKDGCEYHLGLTPTGILVFERDQKIGLFFWPKISKLDFKKKKL 296
            |..||..||.|.|||||:|.....:|.:..||:..:|:|::....:|..|.||||.|:.:|:...
Zfish   227 EINFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCASGLLIYRDRLRINRFAWPKILKISYKRSNF 291

  Fly   297 TLIVIEDDDEGREQEHTFVFRLYNEKACKHLWKCAVEHHTFFRLRAPVKGPSARQNFFRMGSRFR 361
            .:.:...:.|  :.|.|..|:|.|.:|.|.|||..:||||||||.:|...|   :.|..:||:||
Zfish   292 YIKIRPGEYE--QFESTIGFKLPNHRASKRLWKVCIEHHTFFRLVSPEPPP---KGFLVIGSKFR 351

  Fly   362 YSGRTEFQTTQQSRA--RRTVQFERRPSQRF-ASR----QSHLLRERQKASQEAAVSAVASVNAR 419
            |||||:.|:.|.|..  |...||||..|:|: .||    :|.|.....:.||.            
Zfish   352 YSGRTQAQSRQASALIDRPAPQFERSISRRYLLSRSIDGESALGDTMDRLSQH------------ 404

  Fly   420 AAAAAAAAAASQSPAPATPL--VSSQVSTPTPNNDNNNDAFDSLISTDQFITVTPSPSVLTVIQN 482
                     .|..|.|:.|.  :......|:.:.|.:.|       .:|              :.
Zfish   405 ---------TSSEPVPSLPRDELDQDYLEPSLDQDLDQD-------HEQ--------------EE 439

  Fly   483 SAIIEPDAACSGSISSSSQAAANFASLGRNSLKSNFSNEDPAYSKIGSIGKASGLTVKLDPDYTP 547
            ...:|.|:..|.::....:.|.:                 |..||           .:||.|.||
Zfish   440 EQRLESDSTPSKTVELKREEAGS-----------------PVDSK-----------TELDQDLTP 476

  Fly   548 PYSPNATKNFDETNPFRNATSSHHGSFGK-------------------ASISSGQLSVKSGLSDK 593
              .|...:..|:.   .:....|..|..:                   :..|||....|...|::
Zfish   477 --RPKQEQFLDKP---EDVLQKHQASINELKRALREPNSKLVHREKRLSGASSGSTPEKKSASEE 536

  Fly   594 ----------DRELDSLLKSIVKDPSPSVLA---------NEAINDANSIRVTINKTFDMDHNTE 639
                      .|:| .|.|...|..||.|.:         ::.:.:.|.|.|.            
Zfish   537 SLLIEKQDGCQRDL-PLSKKDEKSRSPRVASLATGFNRETDDRVREKNIISVA------------ 588

  Fly   640 TLKRLSNAN----EKP-NNQVKLANVNTTALPPGNIKCNILKARVEEELGAGGNAKLTNQMFVPA 699
              ||.|..|    ||| .|:.|     :.||...:.:               |...|..:.:   
Zfish   589 --KRTSTENILSPEKPLRNRAK-----SPALRYNHFQ---------------GINSLDEKAY--- 628

  Fly   700 AHSSNMHTSNTNSSNNHAHSDGPDSLNATYIS--VGGDKLTLSIPEQKPSTGSSSSSSTSSTATT 762
               .|.|:.:...|.|..|::|.|    ||.:  :.|||..:.:              |:....|
Zfish   629 ---DNGHSHDRPLSENVIHTNGCD----TYATERLWGDKKYMGV--------------TNIEHET 672

  Fly   763 TTNGNGPYSNATFVSGFSAPLTPPSSLPANLNNTGSGC----------NT--TLTSVTTISTPSS 815
            |......|...:|  |.::|.........:..|. |.|          ||  ||...|:.:.|..
Zfish   673 TNQDLARYVERSF--GEASPNAAMDKYMRDRYNE-SRCERQSYEKEPENTRATLLKQTSKADPKG 734

  Fly   816 PTATV---STTASES-------VAP--------------ALSNASAAEILINEIFINNIINNNAS 856
            ..:|:   .:|||::       :.|              |......:|..|:..|..:...|:..
Zfish   735 KGSTIQRHDSTASDTSQSELKRIVPLKPERSKKLKDRKGAKLQGQPSERSISGSFDESEGINSKE 799

  Fly   857 GSITAETAAKPAGSSTPSAGTLLFSTLSEQE---RLESQKTNQQMNQSL----NLNQNHSEVDAP 914
            ..:..|.|......|..||......|.::|:   ...:.:|.:.:.||:    .|....:.:|..
Zfish   800 DQVVFENALDTLSQSKNSATLESIGTFAKQDWASNYHNWETREYIRQSVQDRPQLRDLKNNIDHR 864

  Fly   915 PSEKKTPSNYPDS-SRIPFPSSSN--SKDMVSP 944
            .|.::....:.|. ....||::|.  :.|.::|
Zfish   865 LSIEQDQFLFDDPLFMFDFPTNSTFPAFDQIAP 897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yrtNP_650291.1 B41 60..250 CDD:214604 87/189 (46%)
FERM_N 62..124 CDD:286467 28/61 (46%)
FERM_M 143..250 CDD:278785 51/106 (48%)
FERM_C_NBL4_NBL5 246..339 CDD:270007 33/92 (36%)
FA 352..392 CDD:285894 20/42 (48%)
PHA03255 771..>924 CDD:165513 35/195 (18%)
si:dkey-178k16.1XP_009294955.1 B41 56..245 CDD:214604 87/189 (46%)
FERM_N 58..120 CDD:286467 28/61 (46%)
FERM_M 138..245 CDD:278785 51/106 (48%)
FERM_C_4_1_family 240..333 CDD:270005 35/94 (37%)
FA 342..383 CDD:285894 20/40 (50%)
SAB 482..522 CDD:282265 3/42 (7%)
4_1_CTD <1210..1261 CDD:283537
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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