DRSC/TRiP Functional Genomics Resources

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Protein Alignment yrt and Mylip

DIOPT Version :10

Sequence 1:NP_650291.1 Gene:yrt / 41656 FlyBaseID:FBgn0004049 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_001100814.2 Gene:Mylip / 306825 RGDID:1305761 Length:445 Species:Rattus norvegicus


Alignment Length:415 Identity:107/415 - (25%)
Similarity:175/415 - (42%) Gaps:89/415 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 CRVILLDNTDLSIELSKKALGSFLYEQVFYALDIIEKDYFGLQFMDANHVKHWLDPTKPIKKQVK 124
            |.|...|...:.:|:..||.|.....||...|.|||.|||||||..:.....||:....|.:|:.
  Rat     3 CYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRNRISQQMD 67

  Fly   125 IGPPYTFRLKVKFYSSEPNTLREELTRYLFFLQLKQDLLEGRLDCPEDKATELCALALQSELGDY 189
            ...||..:|:|||: .||:.:.:|.||::|||.:|:.||.|.|.|..::|.||.||..|::.|||
  Rat    68 GLAPYRLKLRVKFF-VEPHLILQEQTRHIFFLHIKESLLAGHLQCSPEQAVELSALLAQTKFGDY 131

  Fly   190 D------------NQEHSAATVSEFRFVPEQTEDLEIAILDEYKTCRGLTPAQAETAFLNKAKWL 242
            :            .:|.|::|::              :|:.::|...|::.|.||...|.....:
  Rat   132 NQNTAQYSYEDLCEKELSSSTLN--------------SIVGKHKELEGISQASAEYQVLQIVSAM 182

  Fly   243 DMYGVDMHTVLGKDGCEYHLGLTPTGILVFERD-QKIGLFFWPKISKLDFKKKKLTLIVIEDDDE 306
            :.||::.|.|...:|.:..:|:.|.||.:.:.| ..|....:|.:.......|.:.|.|.::.. 
  Rat   183 ENYGIEWHAVRDSEGQKLLIGVGPEGISICKEDFSPINRIAYPVVQMATQSGKNVYLTVTKESG- 246

  Fly   307 GREQEHTFVFRLYNEKACKHLWKCAVEHHTFFR-----------LRAPVKGPSA----RQNFFRM 356
               .....:|::.:.:|...|::...|.|.|:|           ....:||..|    .:| ..:
  Rat   247 ---NSIVLLFKMISTRAASGLYRAITETHAFYRCDTVTSAVMMQYSRDLKGHLASLFLNEN-INL 307

  Fly   357 GSRFRYS-GRTEFQTTQQSRARRTVQFERRPSQRFASRQSHLLRERQKASQEAAVSAVASVNARA 420
            |.::.:. .||..:....:|                           :|...|.|..:.|.|   
  Rat   308 GKKYVFDIKRTSKEVYDHAR---------------------------RALYNAGVVDLVSRN--- 342

  Fly   421 AAAAAAAAASQSPAPATPLVSSQVS 445
                     .||| |::||.||..|
  Rat   343 ---------DQSP-PSSPLKSSDSS 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yrtNP_650291.1 B41 60..250 CDD:214604 65/201 (32%)
FERM_C_NBL4_NBL5 246..339 CDD:270007 20/93 (22%)
FA 352..393 CDD:462582 5/41 (12%)
PHA03255 771..>924 CDD:165513
MylipNP_001100814.2 FERM_F1_MYLIP 1..81 CDD:340624 29/77 (38%)
B41 5..190 CDD:214604 64/199 (32%)
FERM_C_MYLIP_IDOL 185..295 CDD:270016 23/113 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 341..363 10/30 (33%)
RING-HC_MYLIP 383..434 CDD:438186
Critical for homodimerization. /evidence=ECO:0000250 431..433
Blue background indicates that the domain is not in the aligned region.

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