DRSC/TRiP Functional Genomics Resources

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Protein Alignment yrt and epb41l4a

DIOPT Version :9

Sequence 1:NP_650291.1 Gene:yrt / 41656 FlyBaseID:FBgn0004049 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_571298.2 Gene:epb41l4a / 30470 ZFINID:ZDB-GENE-990415-20 Length:671 Species:Danio rerio


Alignment Length:732 Identity:220/732 - (30%)
Similarity:332/732 - (45%) Gaps:115/732 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 CRVILLDNTDLSIE-----LSKKALGSFLYEQVFYALDIIEKDYFGLQFMDANHVKHWLDPTKPI 119
            |.|:|||.:.|.:.     :.|...|..:.:.||..:::.|.:||||::.|.:|...||||:|.:
Zfish    13 CEVLLLDESKLILTTQQQGIKKSTRGCVVMDYVFSHVNLAETEYFGLRYCDRSHQTFWLDPSKTL 77

  Fly   120 ---KKQVKIGPPYTFRLKVKFYSSEPNTLREELTRYLFFLQLKQDLLEGRLDCPEDKATELCALA 181
               |..:..|||||....||||:.:|..|:||:|||.||||:|||:|:|||.|..:.:.:|.|||
Zfish    78 AEHKDLIATGPPYTLYFGVKFYAEDPGKLKEEITRYQFFLQVKQDVLQGRLPCAFNISAQLAALA 142

  Fly   182 LQSELGDYDNQEHSAATVSEFRFVPEQTEDLEIAILDEYKTCRGLTPAQAETAFLNKAKWLDMYG 246
            :||||||||..:|:|..|||:||||:|.||||.:|...:||..|..||:||..:|..||.|:|||
Zfish   143 IQSELGDYDPYKHTAGYVSEYRFVPDQKEDLEDSIEQIHKTLLGQVPAEAENNYLAIAKTLEMYG 207

  Fly   247 VDMHTVLGKDGCEYHLGLTPTGILVFERDQKIGLFFWPKISKLDFKKKKLTLIVIEDDDEGRE-Q 310
            ||:|.|.|:...||.|||||.|::|::...::|.:|||:|:|:.||:.:..|.|:     ||: .
Zfish   208 VDLHPVFGEKQAEYFLGLTPVGVVVYKNKTQVGKYFWPRITKVYFKETQFELRVL-----GRDCN 267

  Fly   311 EHTFVFRLYNEKACKHLWKCAVEHHTFFRLRAPVKGPSARQ--NFFRMGSRFRYSGRTEFQTTQQ 373
            |.:|.|...::.|||:||||.||||||||:.........|:  .|..:||:.||||:|..|..::
Zfish   268 ETSFFFDAASKTACKNLWKCCVEHHTFFRMPENESNSLTRKLSKFSSLGSKHRYSGKTAMQIGRE 332

  Fly   374 SR---ARRTVQFERRPSQRFASRQSHLLRERQKASQEAAVSAVASVNARAAAAAAAAAASQSPAP 435
            |.   .|..:|..|..|:.:..|.:      |.|.:.....||..:...:......:|.:...:|
Zfish   333 STETLPRADLQVIRTRSKTYPKRST------QPAGRNNGGQAVTKMENTSEGQPKTSALTPVKSP 391

  Fly   436 ATPLVSSQVSTPTPNNDNNNDAFDSLISTDQFITVTPSPSVLTVIQNSAIIEPDAACSGSISSSS 500
            .....|:.|....|                                 ||..|.||..||..:|:|
Zfish   392 RVKAESASVQQDKP---------------------------------SAPWEEDAPQSGLYNSAS 423

  Fly   501 QAAANFASLGRNSLKSNFSNEDPAYSKIGSIGKASGLTVKLDPDYTPPYSPNATKNFDETNPFRN 565
            :                 .|:.|.:.|......:.|             |.|..::.....|...
Zfish   424 E-----------------RNKSPKFPKAHRRSPSGG-------------SENEPRHRRGQTPDDA 458

  Fly   566 ATSSHHGSFGKASISSGQLSVKSGLSDKDRELDSLLKSIVKDPSPSVLANEAINDANSIRVTINK 630
            ..|..|   .:.|.|.|..|..|...:.:||..       |..:.|...||.::.|....|.:.:
Zfish   459 QASKQH---RRRSRSRGNTSSGSESENSNREHR-------KKRNRSRQENEMVDSAPQWEVVLRR 513

  Fly   631 TFDMDHN--TETLKRLSNANEKPNNQVK---LANVNTTALPPGNIKCNILKARVEEELGAGGNAK 690
            ..:...|  .:...|..:.:..|:.|.|   ..::....:.|..:....||....:::...|:..
Zfish   514 QKEKTPNDPNQRRSRHRSRSRSPDVQAKEQLWKHIQKELVDPSGLSEEQLKEIPYKKVETQGDPI 578

  Fly   691 LTNQMFVP-------AAHSSNMHTSNTNSSNNHAHSDGPDSLNATYISVGGDKLTLSIPEQKPST 748
            .......|       .:|.|:...|..:..|:......|.::..| ..|.|..   |.|.|| ..
Zfish   579 KIRHSHSPRSFRQYRRSHCSDGERSVLSEVNSRTDLVPPLAVTRT-ADVPGSS---STPAQK-KK 638

  Fly   749 GSSSSSSTSSTATTTTN 765
            ||..:.|.||...|.::
Zfish   639 GSKDTLSESSEQDTKSS 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yrtNP_650291.1 B41 60..250 CDD:214604 94/197 (48%)
FERM_N 62..124 CDD:286467 22/69 (32%)
FERM_M 143..250 CDD:278785 61/106 (58%)
FERM_C_NBL4_NBL5 246..339 CDD:270007 43/93 (46%)
FA 352..392 CDD:285894 14/42 (33%)
PHA03255 771..>924 CDD:165513
epb41l4aNP_571298.2 B41 13..211 CDD:214604 94/197 (48%)
FERM_N 15..82 CDD:286467 21/66 (32%)
FERM_M 105..211 CDD:278785 61/105 (58%)
FERM_C_NBL4_NBL5 207..296 CDD:270007 43/93 (46%)
FA 311..354 CDD:285894 14/42 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..541 53/296 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586172
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3530
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D241659at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23280
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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