DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yrt and epb41l4a

DIOPT Version :10

Sequence 1:NP_650291.1 Gene:yrt / 41656 FlyBaseID:FBgn0004049 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_571298.2 Gene:epb41l4a / 30470 ZFINID:ZDB-GENE-990415-20 Length:671 Species:Danio rerio


Alignment Length:732 Identity:220/732 - (30%)
Similarity:332/732 - (45%) Gaps:115/732 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 CRVILLDNTDLSIE-----LSKKALGSFLYEQVFYALDIIEKDYFGLQFMDANHVKHWLDPTKPI 119
            |.|:|||.:.|.:.     :.|...|..:.:.||..:::.|.:||||::.|.:|...||||:|.:
Zfish    13 CEVLLLDESKLILTTQQQGIKKSTRGCVVMDYVFSHVNLAETEYFGLRYCDRSHQTFWLDPSKTL 77

  Fly   120 ---KKQVKIGPPYTFRLKVKFYSSEPNTLREELTRYLFFLQLKQDLLEGRLDCPEDKATELCALA 181
               |..:..|||||....||||:.:|..|:||:|||.||||:|||:|:|||.|..:.:.:|.|||
Zfish    78 AEHKDLIATGPPYTLYFGVKFYAEDPGKLKEEITRYQFFLQVKQDVLQGRLPCAFNISAQLAALA 142

  Fly   182 LQSELGDYDNQEHSAATVSEFRFVPEQTEDLEIAILDEYKTCRGLTPAQAETAFLNKAKWLDMYG 246
            :||||||||..:|:|..|||:||||:|.||||.:|...:||..|..||:||..:|..||.|:|||
Zfish   143 IQSELGDYDPYKHTAGYVSEYRFVPDQKEDLEDSIEQIHKTLLGQVPAEAENNYLAIAKTLEMYG 207

  Fly   247 VDMHTVLGKDGCEYHLGLTPTGILVFERDQKIGLFFWPKISKLDFKKKKLTLIVIEDDDEGRE-Q 310
            ||:|.|.|:...||.|||||.|::|::...::|.:|||:|:|:.||:.:..|.|:     ||: .
Zfish   208 VDLHPVFGEKQAEYFLGLTPVGVVVYKNKTQVGKYFWPRITKVYFKETQFELRVL-----GRDCN 267

  Fly   311 EHTFVFRLYNEKACKHLWKCAVEHHTFFRLRAPVKGPSARQ--NFFRMGSRFRYSGRTEFQTTQQ 373
            |.:|.|...::.|||:||||.||||||||:.........|:  .|..:||:.||||:|..|..::
Zfish   268 ETSFFFDAASKTACKNLWKCCVEHHTFFRMPENESNSLTRKLSKFSSLGSKHRYSGKTAMQIGRE 332

  Fly   374 SR---ARRTVQFERRPSQRFASRQSHLLRERQKASQEAAVSAVASVNARAAAAAAAAAASQSPAP 435
            |.   .|..:|..|..|:.:..|.:      |.|.:.....||..:...:......:|.:...:|
Zfish   333 STETLPRADLQVIRTRSKTYPKRST------QPAGRNNGGQAVTKMENTSEGQPKTSALTPVKSP 391

  Fly   436 ATPLVSSQVSTPTPNNDNNNDAFDSLISTDQFITVTPSPSVLTVIQNSAIIEPDAACSGSISSSS 500
            .....|:.|....|                                 ||..|.||..||..:|:|
Zfish   392 RVKAESASVQQDKP---------------------------------SAPWEEDAPQSGLYNSAS 423

  Fly   501 QAAANFASLGRNSLKSNFSNEDPAYSKIGSIGKASGLTVKLDPDYTPPYSPNATKNFDETNPFRN 565
            :                 .|:.|.:.|......:.|             |.|..::.....|...
Zfish   424 E-----------------RNKSPKFPKAHRRSPSGG-------------SENEPRHRRGQTPDDA 458

  Fly   566 ATSSHHGSFGKASISSGQLSVKSGLSDKDRELDSLLKSIVKDPSPSVLANEAINDANSIRVTINK 630
            ..|..|   .:.|.|.|..|..|...:.:||..       |..:.|...||.::.|....|.:.:
Zfish   459 QASKQH---RRRSRSRGNTSSGSESENSNREHR-------KKRNRSRQENEMVDSAPQWEVVLRR 513

  Fly   631 TFDMDHN--TETLKRLSNANEKPNNQVK---LANVNTTALPPGNIKCNILKARVEEELGAGGNAK 690
            ..:...|  .:...|..:.:..|:.|.|   ..::....:.|..:....||....:::...|:..
Zfish   514 QKEKTPNDPNQRRSRHRSRSRSPDVQAKEQLWKHIQKELVDPSGLSEEQLKEIPYKKVETQGDPI 578

  Fly   691 LTNQMFVP-------AAHSSNMHTSNTNSSNNHAHSDGPDSLNATYISVGGDKLTLSIPEQKPST 748
            .......|       .:|.|:...|..:..|:......|.::..| ..|.|..   |.|.|| ..
Zfish   579 KIRHSHSPRSFRQYRRSHCSDGERSVLSEVNSRTDLVPPLAVTRT-ADVPGSS---STPAQK-KK 638

  Fly   749 GSSSSSSTSSTATTTTN 765
            ||..:.|.||...|.::
Zfish   639 GSKDTLSESSEQDTKSS 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yrtNP_650291.1 B41 60..250 CDD:214604 94/197 (48%)
FERM_C_NBL4_NBL5 246..339 CDD:270007 43/93 (46%)
FA 352..393 CDD:462582 14/43 (33%)
PHA03255 771..>924 CDD:165513
epb41l4aNP_571298.2 B41 13..211 CDD:214604 94/197 (48%)
FERM_C_NBL4_NBL5 207..296 CDD:270007 43/93 (46%)
FA 311..355 CDD:462582 14/43 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..541 53/296 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.