DRSC/TRiP Functional Genomics Resources

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Protein Alignment yrt and Farp2

DIOPT Version :10

Sequence 1:NP_650291.1 Gene:yrt / 41656 FlyBaseID:FBgn0004049 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_663494.2 Gene:Farp2 / 227377 MGIID:2385126 Length:1065 Species:Mus musculus


Alignment Length:476 Identity:172/476 - (36%)
Similarity:251/476 - (52%) Gaps:42/476 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GAITSGGSSQIKPQRIV---VNKNKIDCRVILLDNTDLSIELSKKALGSFLYEQVFYALDIIEKD 97
            |..|:.|.|.::|::.:   :.:..:..||.|||:|....::..|..|..|..||:..|::||.|
Mouse    19 GGQTAIGVSTLEPEQSLSPRMQEKHMRIRVKLLDSTVELFDIEPKCDGQVLLTQVWKHLNLIECD 83

  Fly    98 YFGLQFMDANHVKHWLDPTKPIKKQVKIGPPYTFRLKVKFYSSEPNTLREELTRYLFFLQLKQDL 162
            ||||:|.:......||:|.|||.:||:.......||.|||:..:|..|:||.|||||.||||:||
Mouse    84 YFGLEFKNVQSYWIWLEPMKPIIRQVRKPKNAVLRLAVKFFPPDPGQLQEEYTRYLFALQLKRDL 148

  Fly   163 LEGRLDCPEDKATELCALALQSELGDYD---NQEHSAATVSEFRFVPEQTEDLEIAILDEYKTCR 224
            ||.||.|..:.|..|.:..||||:||||   ::||..|.    .::|.|.:.|| .|||.::...
Mouse   149 LEERLTCTANTAALLISHLLQSEIGDYDETLDREHLKAN----EYLPNQEKSLE-KILDFHQRHT 208

  Fly   225 GLTPAQAETAFLNKAKWLDMYGVDMHTVLGKDGCEYHLGLTPTGILVFERDQKIGLFFWPKISKL 289
            |.|||:::...|..|:.|:|||:..|....::|.:.:|.::..|:|||:...||..|.|.|:.||
Mouse   209 GQTPAESDFQVLEIARKLEMYGIRFHMASDREGTKINLAVSHMGVLVFQGTTKINTFNWSKVRKL 273

  Fly   290 DFKKKKLTLIVIEDDDEGREQEHTFVFRLYNEKACKHLWKCAVEHHTFFRLRAPVKGPSARQNFF 354
            .||:|:. ||.:..:..|..|: |..|.|.:...||:.||..||:||||||....| |.|:..||
Mouse   274 SFKRKRF-LIKLHPEVHGPYQD-TLEFLLGSRDECKNFWKICVEYHTFFRLSDQPK-PKAKAVFF 335

  Fly   355 RMGSRFRYSGRTEFQTTQ--QSRARRTVQFERRPSQRFASRQSHLLRERQKASQEAAVSAVASVN 417
            ..||.|||||||:.|...  :....:.:.:|||.|:...|..: |..:..|.|    ||....: 
Mouse   336 SRGSSFRYSGRTQKQLVDYVKDGGMKRIPYERRHSKTRTSLHA-LTVDLPKQS----VSFTDGL- 394

  Fly   418 ARAAAAAAAAAASQSPAPATPLVSSQVSTPTPNNDNNNDAFDSLISTDQFITVTPSPSVLTVIQN 482
             |.:|:.::|..|..|.|::.|      :| |...|..|:..||        |.|...|:    .
Mouse   395 -RTSASLSSANVSFYPPPSSSL------SP-PGLPNLKDSSSSL--------VDPQAPVI----K 439

  Fly   483 SAIIEPDAACSGSISSSSQAA 503
            |...|..:..|.|...|:|:|
Mouse   440 STAAERSSGPSSSDGPSTQSA 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yrtNP_650291.1 B41 60..250 CDD:214604 83/192 (43%)
FERM_C_NBL4_NBL5 246..339 CDD:270007 34/92 (37%)
FA 352..393 CDD:462582 16/42 (38%)
PHA03255 771..>924 CDD:165513
Farp2NP_663494.2 B41 45..234 CDD:214604 83/193 (43%)
FERM_C_FARP1-like 221..341 CDD:270014 48/122 (39%)
FA 333..375 CDD:462582 16/41 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 406..489 20/74 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 504..534
RhoGEF 540..723 CDD:238091
PH1_FARP1-like 752..859 CDD:269928
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 874..902
PH2_FARP1-like 929..1026 CDD:270055
Blue background indicates that the domain is not in the aligned region.

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