DRSC/TRiP Functional Genomics Resources

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Protein Alignment yrt and Epb41l3

DIOPT Version :10

Sequence 1:NP_650291.1 Gene:yrt / 41656 FlyBaseID:FBgn0004049 Length:972 Species:Drosophila melanogaster
Sequence 2:XP_006523675.1 Gene:Epb41l3 / 13823 MGIID:103008 Length:1425 Species:Mus musculus


Alignment Length:1102 Identity:263/1102 - (23%)
Similarity:423/1102 - (38%) Gaps:254/1102 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SSQI--KPQRIVVNKNKIDCRVILLDNTDLSIELSKKALGSFLYEQVFYALDIIEKDYFGLQFMD 105
            ||::  .|.:||.....:.|:|.|||.::...::.|::.|..|:::|...|:::|||||||.:.|
Mouse   101 SSKLSRSPLKIVKRPKSMQCKVTLLDGSEYGCDVDKRSRGQVLFDKVCEHLNLLEKDYFGLTYRD 165

  Fly   106 ANHVKHWLDPTKPIKKQVKIGPPYTFRLKVKFYSSEPNTLREELTRYLFFLQLKQDLLEGRLDCP 170
            |.:.|:||||.|.||||::.| .:.|...||||..:|..|.|::|||...|||:.|::.|||.|.
Mouse   166 AENQKNWLDPAKEIKKQIRSG-AWHFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCS 229

  Fly   171 EDKATELCALALQSELGDYDNQEHSAATVSEFRFVPEQTEDLEIAILDEYKTCRGLTPAQAETAF 235
            ......|.:..:||||||||..|.....:|||||.|..|::||..:::.:|:.||:|||:||..|
Mouse   230 FVTLALLGSYTVQSELGDYDPDECGNDYISEFRFAPNHTKELEDKVIELHKSHRGMTPAEAEMHF 294

  Fly   236 LNKAKWLDMYGVDMHTVLGKDGCEYHLGLTPTGILVFERDQKIGLFFWPKISKLDFKKKKLTLIV 300
            |..||.|.|||||:|.....:|.|..||:..:|:|::....:|..|.|||:.|:.:|:....:.:
Mouse   295 LENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAWPKVLKISYKRNNFYIKI 359

  Fly   301 IEDDDEGREQEHTFVFRLYNEKACKHLWKCAVEHHTFFRLRAPVKGPSARQNFFRMGSRFRYSGR 365
            ...:.|  :.|.|..|:|.|.:|.|.|||..|||||||||..|...|   :.|..:||:||||||
Mouse   360 RPGEFE--QFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLLLPEAPP---KKFLTLGSKFRYSGR 419

  Fly   366 TEFQTTQQSRA--RRTVQFERRPSQRFASRQSHLLRERQKASQEAAVSAVASVNARAAAAAAAAA 428
            |:.||.:.|..  |....|||..|:|:...:|         ...|:||....:..:.:.:||...
Mouse   420 TQAQTRRASALIDRPAPYFERSSSKRYTMSRS---------LDGASVSENHEIYMKDSVSAAEVG 475

  Fly   429 ASQSPAPATPLVSSQVSTPTPNNDNNNDAFDSLISTDQFITVTPSPSVLTVIQNSAIIEPDAACS 493
            ..|.........::.::|.||......:..:......:....||    :|.:::.....|....:
Mouse   476 TGQYATTKGISQTNLITTVTPEKKAEEERVEEEDRRKKAEEATP----VTALRHEGKSPPGHGAA 536

  Fly   494 GSISSSSQAA-------------------ANFASLGRNSL-KSNFSNEDPAYSKIGSIGKASGL- 537
            .|...|..:|                   |..:||...:. |:...::|.|:|.....||.:.| 
Mouse   537 DSCPPSPPSAHPDPPPPTELRRRCKEKERAEPSSLESEAQGKAYLGDQDVAFSYRQPAGKGTTLF 601

  Fly   538 ----------TVKLDPD--------------------------------------------YTPP 548
                      ...||.|                                            ::.|
Mouse   602 SFSLQLPESFPSLLDEDGYLSFPNLSETNLLPQSWQHFLPIRSPSLLPCFLFIFFFLLSASFSVP 666

  Fly   549 Y--------------------SPNATKNFDETNPFRNATSSHHGSFGKASISSGQLSVKSGLSDK 593
            |                    |.:|:.:.|.::.....|.|....    :.:.|:.|......::
Mouse   667 YALTLSFPLALCLCYLEPKAASLSASLDNDPSDSSEEETDSERTD----TAADGETSATESDQEE 727

  Fly   594 DREL---DSLLKSIVKDPSPSVLANEAINDANSIRVTINKTFD--MDHNTETLKRLSNANEKPNN 653
            |.|:   :||:|.|..:       |..:..:|.:...::||.|  |.|.| .:..|.....:.:.
Mouse   728 DAEIKAQNSLIKRIKGE-------NVYVKHSNLMLEDLDKTQDELMKHQT-NISELKRTFLETST 784

  Fly   654 QVKLANVNTTALPPGNIKCNILKARVEEELGAGGNAKLTNQMFVPAAHSSNMHTSNTNSSNNHAH 718
            :..|.|.....|....::   |.||.|:       |.:...: ||.........|.         
Mouse   785 ETALTNEWEKRLSTSPVR---LAARQED-------APMIEPL-VPEETKEEREISE--------- 829

  Fly   719 SDGPDSLNATYISVGGDKLTLSIPEQKPSTGSSSSSSTSSTATTTTNGNGPYSNATFVSGFSAPL 783
                   ...::..|.....    |.:||....:....|:.:..||:                .:
Mouse   830 -------KVVFLQQGSSPFL----ESQPSVTEKTQEGVSADSVATTH----------------QI 867

  Fly   784 TPPSSLPANLNNTGSGCNTTLTSVTTISTPSS-----PTATVSTTASESVAPALSNAS------- 836
            ....::|:.|..|.............:...|.     ...|||:...|..|..|.:..       
Mouse   868 IFQKTVPSTLEGTEDWVIVDKIPTEVVDGDSKKIVTYKVVTVSSKTGEIPADLLKSGMMDMHGFD 932

  Fly   837 --AAEILINE-----IFINNIINNNASGSITAETAAKPAGSSTPSAGTL---------------L 879
              ..|:.:.|     |:......:..||.|...|.....|...|...||               :
Mouse   933 DLTREMQLKEENKQKIYTLGKSYDTVSGRIVTMTGKAKDGEKGPQLSTLEGLQKMERGASEAVRV 997

  Fly   880 FSTLSEQERLE------SQKTNQQMNQSLNLNQNHSEVDAPPSEKKTPSNYPDSSRIP------- 931
            ...|.|.|.||      |::..:.......|:::.:.:....|.:::|.. .|:.:.|       
Mouse   998 GPLLVEYEVLEALTDEKSRRAPEVQTPKRRLSESLAPIKEAESRRQSPEE-DDTQKAPKLGDYAP 1061

  Fly   932 -FPSSSNS-----------------KDMVSPWLVSSE----VVSAPKGRESAIIRKSVITTQ 971
             .|..|.:                 :..:|.|..|.|    |.:|....||:  ...|:|.|
Mouse  1062 AHPQFSKTQQEPECKVLKVGPFGPRRKSLSEWRYSHEPAFTVATAHYVTESS--ASQVVTKQ 1121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yrtNP_650291.1 B41 60..250 CDD:214604 86/189 (46%)
FERM_C_NBL4_NBL5 246..339 CDD:270007 34/92 (37%)
FA 352..393 CDD:462582 19/42 (45%)
PHA03255 771..>924 CDD:165513 30/192 (16%)
Epb41l3XP_006523675.1 B41 120..309 CDD:214604 86/189 (46%)
FERM_C_4_1_family 304..397 CDD:270005 36/94 (38%)
FA 406..449 CDD:462582 19/42 (45%)
SAB 754..802 CDD:461285 10/48 (21%)
4_1_CTD 1311..1417 CDD:461774
Blue background indicates that the domain is not in the aligned region.

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