DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yrt and epb41l4b

DIOPT Version :10

Sequence 1:NP_650291.1 Gene:yrt / 41656 FlyBaseID:FBgn0004049 Length:972 Species:Drosophila melanogaster
Sequence 2:XP_005158090.1 Gene:epb41l4b / 100332627 ZFINID:ZDB-GENE-100921-92 Length:729 Species:Danio rerio


Alignment Length:849 Identity:304/849 - (35%)
Similarity:401/849 - (47%) Gaps:211/849 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRFL----SRRKVRNNYVDNSREGGGATSSAVGVAGGGGAITSGGSSQIKPQRIVV-------- 53
            |:.||    |||..||....:..:|       .|...||.|:......|:.....||        
Zfish     1 MMGFLRRTFSRRSKRNARPPSEVDG-------TGNVRGGNAVLQAHQQQVIHAPTVVTGGAVVHI 58

  Fly    54 -----NKNKIDCRVILLDNTDLSIELSKKALGSFLYEQVFYALDIIEKDYFGLQFMDANHVKHWL 113
                 :|:.|.|||:|||.:|:::||.|.|.|..|::|:.|.||::|.|||||||||...|.|||
Zfish    59 PAAGNSKDAITCRVLLLDGSDVNVELPKHAKGQDLFDQIMYHLDLVEADYFGLQFMDPEQVAHWL 123

  Fly   114 DPTKPIKKQVKIGPPYTFRLKVKFYSSEPNTLREELTRYLFFLQLKQDLLEGRLDCPEDKATELC 178
            |..||||||::.||||....:|||||||||.|.||.|||||.|||:||:|.|:|.||.|.:.||.
Zfish   124 DAAKPIKKQIRHGPPYRLFFRVKFYSSEPNNLHEEFTRYLFVLQLRQDILSGKLKCPYDVSVELG 188

  Fly   179 ALALQSELGDYDNQEHSAATVSEFRFVPEQTEDLEIAILDEYKTCRGLTPAQAETAFLNKAKWLD 243
            |..|||||||.|..|||...||||||.|:|||.:|..|..::..|||:.|:|||..||||.|||:
Zfish   189 AYCLQSELGDCDPLEHSILLVSEFRFSPKQTEIMEADIYRKWVECRGMIPSQAELNFLNKCKWLE 253

  Fly   244 MYGVDMHTVLGKDGCEYHLGLTPTGILVFERDQKIGLFFWPKISKLDFKKKKLTLIVIEDDDEGR 308
            |||||||.|.|:||.||.||||||||||||...||||||||||::||||:.:|||:|:|||::||
Zfish   254 MYGVDMHFVKGRDGGEYALGLTPTGILVFEGSSKIGLFFWPKITRLDFKRNRLTLVVVEDDEKGR 318

  Fly   309 EQEHTFVFRLYNEKACKHLWKCAVEHHTFFRLRAPVKGPSARQNFFRMGSRFRYSGRTEFQTTQQ 373
            ||||||||:|.:...||||||||||.|.|||||.|....::|.:|.|:|||||:|||||:|.|..
Zfish   319 EQEHTFVFQLSSSHECKHLWKCAVESHAFFRLRQPTHNKTSRSDFTRLGSRFRFSGRTEYQATHS 383

  Fly   374 SRARRTVQFERRPSQRFASRQSHLLRERQKASQEAAVSAVASVNARAAAAAAAAAASQSPAPATP 438
            .:.||...||||||:|:.||                  |.:.|.|...|.....:|..||.|:..
Zfish   384 GKVRRASTFERRPSKRYPSR------------------AQSMVKAMTPAKHPHLSAQTSPEPSLK 430

  Fly   439 LVSSQVSTPTPNNDNNNDAFDSLISTDQFITVTPSPSVLTVIQNSAIIEPDAACSGSISSSSQAA 503
            .....:.                |:.|.:....|.||:.:                         
Zfish   431 PYKHNIP----------------IAQDPWQRSHPPPSLTS------------------------- 454

  Fly   504 ANFASLGRNSLKSNFSNEDPAYSKIGSIGKASGLTVKLDPDYTPPYSPNATKNFD-ETNPFRNAT 567
                               |.|.:...:|..       .|.::.|.|...|:.|. |.|   .|.
Zfish   455 -------------------PLYIQPMELGHT-------PPPHSFPLSAADTRRFSVEEN---EAP 490

  Fly   568 SS-------HHGSFGK------ASISSGQLSVKSGLSDK-DRELDSLLKSIVKDPS--PSVLANE 616
            .|       ||..:.|      .:.......|...|||: ||.|.:.|::   :|:  |::..| 
Zfish   491 HSGKIHRCYHHHGYEKQEPLCLTTAKPKAWVVSPALSDELDRALQNQLEA---EPAAWPALHIN- 551

  Fly   617 AINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNTTALPPGNIKCNILKARVEE 681
                           .||            |.|||.::..|.  ::.|:....:|.||.|...:.
Zfish   552 ---------------IDM------------AEEKPLSEKSLP--SSPAVLQEQLKSNISKRATQS 587

  Fly   682 ELG-AGGNAKLTNQMFVPAAHSSNMHTSNTNSSN----------------NHAHSDGPDSLNATY 729
            :.| :.||:...:|   ...:.|:...|.::|.|                :..|||..|      
Zfish   588 DSGNSKGNSSSGDQ---TDRYPSSSQDSGSSSLNIEKPRVDRRKRLVRQFSFNHSDEDD------ 643

  Fly   730 ISVGGDKLTLSIPEQKPSTGSSSSSSTSSTATTTTNGNGPYSNATFVSGFSAPLTPPSSLPANLN 794
                       :||...:..|..|...||            ||::.......|:.||....:.|.
Zfish   644 -----------LPEALAAISSQCSMGKSS------------SNSSLDKQVQPPIYPPQKDTSRLE 685

  Fly   795 NTGS 798
            :..|
Zfish   686 HDSS 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yrtNP_650291.1 B41 60..250 CDD:214604 115/189 (61%)
FERM_C_NBL4_NBL5 246..339 CDD:270007 67/92 (73%)
FA 352..393 CDD:462582 23/40 (58%)
PHA03255 771..>924 CDD:165513 7/28 (25%)
epb41l4bXP_005158090.1 B41 69..260 CDD:214604 115/190 (61%)
FERM_C_NBL4_NBL5 256..349 CDD:270007 67/92 (73%)
FA 362..403 CDD:462582 23/40 (58%)

Return to query results.
Submit another query.