DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir87a and grid2

DIOPT Version :9

Sequence 1:NP_650290.2 Gene:Ir87a / 41654 FlyBaseID:FBgn0038153 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:651 Identity:114/651 - (17%)
Similarity:199/651 - (30%) Gaps:214/651 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 VENEFRIGASDDDELENDLSSNSSEPEA---------------IIEEFFRAKFEDKFPRDLS--G 333
            |.|..||..|..|         ..:|:|               ::...|..|.||:....::  .
Zfish   299 VRNNHRINTSLCD---------PKDPKAQMLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASLS 354

  Fly   334 CPLTASFRPWE--PYIFRNSEEQPVDDYYYGLQGDEDDYNDT------SPNYGESDDESYA---- 386
            | :....:||:  ..:....::..|......|:.:::..|..      ..||||......:    
Zfish   355 C-IRKGSKPWQGGKSMLETVKKGGVSGLTSLLEFNDNGSNPNIHFEILGTNYGEDRGRGVSRLAT 418

  Fly   387 -DPGEDGDGAIPD-------------------------TETQSGGKLKLSGIEYEMVQTIAERLH 425
             ||....:|.:.|                         :|...|...|..|...:::..:|..|.
Zfish   419 WDPIHGLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGFSIDVLDALANYLG 483

  Fly   426 VSIEMQGENSNLYHLFQQLIDGEIEMIVGGI---------------DEDPSISQFVSSSIPYHQD 475
            ...|:.....:.|.  .|..||....::|.:               .|..|:..|.:..:.|...
Zfish   484 FKYEIYVAPDHKYG--SQQADGTWNGLIGELVFKRADVGLSALTITPERESVVDFTTRYMDYSVG 546

  Fly   476 ELTWCVARAKRRHGFFNFVATFN-------ADAGFLIGIFVVTCSLVVWL------AQRVSGFQL 527
            .|   :.:|:|....|..:|.|:       |....|:|..|.   |:.||      ...||...|
Zfish   547 VL---LRKAERTVDMFACLAPFDLSLWACIAGTVLLVGTLVY---LLNWLNPPRLPMGSVSSTTL 605

  Fly   528 RNLNGYFPTCLRVLGILLNQAIPAQDFPITLRQLFALSFLMGFFFSNTYQSFLISTLTTPRSSYQ 592
            .|...:      |.|..:.|........:..|.:..:.:|......::|.:.|.:.||..|....
Zfish   606 YNSMWF------VYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFLTISRIENS 664

  Fly   593 IHTLQEIYSNKMTVMGT------------------------SEHVRHLNKDGEIFKYIREKFQ-- 631
            |.:||::........||                        |:..|.:|:.|.....:.|..:  
Zfish   665 IQSLQDLAKQTDLPYGTVLDSAVYDQVRSKGMNPFERDPMYSQMWRMINRTGGAENNVEESKEGI 729

  Fly   632 --MCYNLVDCLNDAAQNEHIAVAVSRQHSFYNPRIQRDRLYCFDRRESLYVYLVTMLLPKKYHLL 694
              :.|.....:.|||..|::|:.                    |...|||.              
Zfish   730 RKVKYGRFAFVWDAAVLEYVAIN--------------------DEDCSLYT-------------- 760

  Fly   695 HQINPVIQHIIESGH---MQKWA--RDLDMRRMIH------EEITRV----REDPF--------- 735
                 |..::.:.|:   ||..:  ||:..:|::.      .:|.::    |:.|.         
Zfish   761 -----VSNNVADRGYGMAMQHGSPYRDIFSQRILELQQNGDMDILKLKWWPRDSPCDLYSPVGTR 820

  Fly   736 ---KALTFDQFRGA-IAFSGGLLLVASCVFAFELCYVKYVYRTEKRERKTKKITKKVHN--IKIQ 794
               .||....|.|. ...:.|::|  ||:.|        ...|....||..::..|..:  |.::
Zfish   821 KSGSALDIHSFAGVFFVLAAGVVL--SCLIA--------TVETWWTRRKGSRVPSKEDDKEIDLE 875

  Fly   795 H 795
            |
Zfish   876 H 876

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir87aNP_650290.2 Periplasmic_Binding_Protein_Type_2 408..>475 CDD:304360 14/81 (17%)
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..427 CDD:107386 24/137 (18%)
ANF_receptor 42..404 CDD:279440 18/114 (16%)
PBP2_iGluR_delta_2 440..806 CDD:270449 71/418 (17%)
Lig_chan 568..841 CDD:278489 55/320 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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