DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir87a and GluRIID

DIOPT Version :9

Sequence 1:NP_650290.2 Gene:Ir87a / 41654 FlyBaseID:FBgn0038153 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster


Alignment Length:881 Identity:158/881 - (17%)
Similarity:276/881 - (31%) Gaps:309/881 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQRFWLAALLFLLSQHSEVRGFGINLMKVQTEDKGQEACILALLRKYFDSGDGLSGSVLCINRNY 69
            |...:|..|..|::::. ::|..|.:|:......|....:|..:||..||...:.||...:    
  Fly   163 ESAEYLKILDHLMTRYG-IKGPVIKVMRYDLNLNGNYKSVLRRIRKSEDSRIVVVGSTTGV---- 222

  Fly    70 QLPNIEEQLLRGVNNYENYPWSLLITNSREGPSPAKFLMNEKPQCYFLIVDNLEDEDLDEVFEHW 134
                  .:|||......                    :|||.   |..|:.||.....|  .|.:
  Fly   223 ------AELLRQAQQVG--------------------IMNED---YTYIIGNLNLHTFD--LEEY 256

  Fly   135 K-GMVNWNPLAQFVVYLASLEETDEEMNDLMVELL------------LTFINKKIF----NVNVI 182
            | ...|...:..|       ....||:.|||.:|.            .|||..::.    .|.||
  Fly   257 KYSEANITGIRMF-------SPDQEEVRDLMEKLHQELGESEPVNSGSTFITMEMALTYDAVRVI 314

  Fly   183 GQSEENQFYYGKTVFPYHPDN-NCGNRVISVELLDACDYPSEETDSEDENDEDEG---------- 236
            .::.::        .||.|.. ||..|..:|: .|...:.:.....|.:.....|          
  Fly   315 AETTKH--------LPYQPQMLNCSERHDNVQ-PDGSTFRNYMRSLEIKEKTITGRIYFEGNVRK 370

  Fly   237 ----DGAQEEDDGPQEEGDGEQ----EEEDGPQEQEDGDQAKGDEGQENDDGGLENKVENEFRIG 293
                |..:.:..|..:.|..|:    |.:..||.....|         .|||.|.||.   |.: 
  Fly   371 GFTFDVIELQTSGLVKVGTWEEGKDFEFQRPPQAVNFND---------IDDGSLVNKT---FIV- 422

  Fly   294 ASDDDELENDLSSNSSEPEAIIEEFFRAKFEDKFPRDLSGCPLTASFRPWEPYIFRNSEEQPVDD 358
                      |.|.:::|.|.:.|....                         :..|::.|.   
  Fly   423 ----------LISVATKPYASLVESIDT-------------------------LIGNNQFQG--- 449

  Fly   359 YYYGLQ-----GDEDDYNDTSPNYGESDDESYADPGEDGDGAIPDTETQSGGKLKLSGIEYEMVQ 418
              ||:.     .|:..:|.|           :.|.|.| .|:...|...:.|.||      |:|:
  Fly   450 --YGVDLIKELADKLGFNFT-----------FRDGGND-YGSFNKTTNSTSGMLK------EIVE 494

  Fly   419 TIAERLHVSIEMQGENSNLYHLFQQLIDGEIEMIVGGIDEDPSISQFVSSSIPYHQDELTWCVAR 483
            ..|:.....:.:..|.       :::||..|..:..||            :|.|        |..
  Fly   495 GRADLAITDLTITSER-------EEVIDFSIPFMNLGI------------AILY--------VKP 532

  Fly   484 AKRRHGFFNFVATFNADAGFLIGIFVVTCSLVVWLAQRVSGFQLRN----------------LNG 532
            .|.....|:|:..|:::....:||..:..||..::..|:|..:..|                :|.
  Fly   533 QKAPPALFSFMDPFSSEVWLYLGIAYLGVSLCFFIIGRLSPIEWDNPYPCIEEPEELENQFTINN 597

  Fly   533 --YFPTCLRVLGILLNQAIPAQDFPITLRQLFALSFLMGFFFSNTYQSFLISTLTTPRSSYQIHT 595
              :|.|     |.||.|........::.|.:.|:.:.......::|.:.|.:.||....:..|::
  Fly   598 SLWFTT-----GALLQQGSEIAPKALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINS 657

  Fly   596 LQEIYSNKMTV-------------MGTSEHV------RHLN-----------------KDGEIFK 624
            ::::..||..|             ..|||..      .:||                 |.|..:.
  Fly   658 VKDLADNKDDVQYGAKRTGSTRNFFSTSEEPIYIKMNEYLNAHPEMLMENNQQGVDKVKSGTKYA 722

  Fly   625 YIREKFQMCYNLV-DC----LNDAAQNEHIAVAVSRQHSFYNPRIQRDRLYCFDRRESLYVYLVT 684
            ::.|...:.:|.| :|    :.|....:...:|:.:...:      ||:                
  Fly   723 FLMESTSIEFNTVRECNLTKVGDPLDEKGYGIAMVKNWPY------RDK---------------- 765

  Fly   685 MLLPKKYHLLHQINPVIQHIIESGHM----QKWARDLDMRRMIHEEITRVRED---PFKALTFDQ 742
                        .|..:..:.|.|.:    .||..:      :...:...:.|   | ..|..|.
  Fly   766 ------------FNKALLELQEQGVLARLKNKWWNE------VGAGVCSAKSDDDGP-SELGVDN 811

  Fly   743 FRG--AIAFSGGLLLVASCVFAFELCYVKYVYRTEK 776
            ..|  .:...|.::.:...:    ||:..:||:..|
  Fly   812 LSGIYVVLVIGSIISIIISI----LCWCYFVYKKAK 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir87aNP_650290.2 Periplasmic_Binding_Protein_Type_2 408..>475 CDD:304360 12/66 (18%)
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 56/285 (20%)
ANF_receptor 46..380 CDD:279440 53/268 (20%)
PBP2_iGluR_Kainate 417..788 CDD:270432 83/498 (17%)
Lig_chan 549..819 CDD:278489 49/315 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.