DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir87a and Ir68a

DIOPT Version :9

Sequence 1:NP_650290.2 Gene:Ir87a / 41654 FlyBaseID:FBgn0038153 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_648455.2 Gene:Ir68a / 39269 FlyBaseID:FBgn0036150 Length:704 Species:Drosophila melanogaster


Alignment Length:427 Identity:75/427 - (17%)
Similarity:139/427 - (32%) Gaps:123/427 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 QPVDDYYYGLQGDEDDYND----TSPNYGESDDESYADPGEDGDGAIPDTETQSGGKLKLSGIEY 414
            :||  ||...|.:..|:.:    .|..||..:.:.||..|...|..:.|.......:..:..:  
  Fly   262 KPV--YYKPNQTENMDWTELDGGASVAYGSGNPDGYAQNGTHIDSMLVDEVAAHSARFAIGDL-- 322

  Fly   415 EMVQTIAERLHVSIEMQGENSNLYHLFQQLIDGEIEMIVGGIDEDPSISQFVSSSIPYHQDELTW 479
                                    ||||..:                  :.|..|.|::.:.||:
  Fly   323 ------------------------HLFQVYL------------------KLVELSAPHNFECLTF 345

  Fly   480 CVARAKRRHGFFNFVATFNAD--AGFLIGIFVV--TCSLVVWLAQRVSGFQLRNLNGYFPTCLR- 539
            ....:...:.:..|:..|:|.  .|.|:.:|||  ....:.:|...::|    |::..|..||| 
  Fly   346 LTPESSTDNSWQTFILPFSAGMWVGVLLSLFVVGTVFYAISFLNAIING----NVSSEFFRCLRP 406

  Fly   540 ---------------------------------------------VLGILLNQAIPAQDFPITLR 559
                                                         ...:||..|:|.......||
  Fly   407 NRNVPMDPKIYRRISFRIAISRYRSSKGDRMPRDLFDGYTNCILLTYSMLLYVALPRMPRNWPLR 471

  Fly   560 QLFALSFLMGFFFSNTYQSFLISTLTTPRSSYQIHTLQEIYSNKM--TVMGTSEHVRHLNKDGEI 622
            .|....::.......||::...:.|..|.:...|.||:::..:.:  :...|......|..:.|:
  Fly   472 VLTGWYWIYCILLVATYRASFTAILANPAARVTIDTLEDLLRSHIPPSTGATENRQFFLEANDEV 536

  Fly   623 FKYIREKFQMCYNLVDCLNDAAQNEHIAVAVSRQHSFYNPRIQRDRLYCFDR--------RESLY 679
            .:.:.||.::.....|..:..|:.         |.::|:.......|...|.        :|.:.
  Fly   537 ARKVGEKMEVFGYSDDLTSRIAKG---------QCAYYDNEFYLRYLRVADESGSALHIMKECVL 592

  Fly   680 VYLVTMLLPKKYHLLHQINPVIQHIIESGHMQKWARD 716
            ...|.:.:.|...|..:::..|||:.|.|.:.||.:|
  Fly   593 YMPVVLAMEKNSALKPRVDASIQHLAEGGLIAKWLKD 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir87aNP_650290.2 Periplasmic_Binding_Protein_Type_2 408..>475 CDD:304360 7/66 (11%)
Ir68aNP_648455.2 Lig_chan 429..661 CDD:278489 37/210 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.