DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir87a and Ir7a

DIOPT Version :9

Sequence 1:NP_650290.2 Gene:Ir87a / 41654 FlyBaseID:FBgn0038153 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_572406.1 Gene:Ir7a / 31686 FlyBaseID:FBgn0029961 Length:614 Species:Drosophila melanogaster


Alignment Length:526 Identity:105/526 - (19%)
Similarity:182/526 - (34%) Gaps:165/526 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 LENDLSSNSSEPEAIIEEFFRAKFEDK-FPR--DLSGCPLTASFRPWEPYIFRNSEEQPVDDYYY 361
            ::.|||.|....:......||...|.: |.|  .||||||..|:.|..|::              
  Fly   179 MDCDLSVNLELIDIYKNGLFRHGHEARSFNRVLSLSGCPLQVSWYPLPPFV-------------- 229

  Fly   362 GLQGDEDDYNDTSPNYGESDDESYADPGEDGDGAIPDTETQSGGKLKLSGIEYEMVQTIAERLHV 426
                                  |:.     |:.:.|:...|.   .:|:||:.|:::.:|.....
  Fly   230 ----------------------SFI-----GNSSDPEERAQI---WRLTGIDGELIKLLASIFDF 264

  Fly   427 SIEMQGE---------NSNLYHLFQQLIDGEIEMIVG---GIDEDPSISQFVSSSIPYHQDELTW 479
            .|.::..         ..:....|.|:|.....:::|   |..:..|...|.||   |||..|. 
  Fly   265 RILLEEPCNKCLSPDIKDDCSGCFDQVIISNSSILIGAMSGSHQHRSHFSFTSS---YHQSSLV- 325

  Fly   480 CVARAKRRHGFFNFVATFNADAGFLIGIFVVTCSLVVWLAQRVSGFQL------RN-----LNGY 533
                         |:...::..| .:....|..:::||||..||...|      ||     .:..
  Fly   326 -------------FIMHMSSQFG-AVAQLAVPFTVIVWLALVVSSLLLVLVLWMRNRLVCGRSDL 376

  Fly   534 FPTCLRVLGILLNQAIPAQDFPIT--LRQLFALSFLMGFFFSNTYQSFLISTLTTP--------- 587
            ....|:||..|:...:.|:..|.:  ||.|:|...|:.......||..|..:...|         
  Fly   377 ASHALQVLTTLMGNPLEARSLPRSSRLRILYAGWLLLVLVLRVVYQGKLFDSFRLPYHKPLPTEI 441

  Fly   588 ----RSSYQIHTLQ--EIYSNKMTVMGTS------EHVRHLNKDGEIFKYIREKFQMCYNLVDCL 640
                ||:|.:...:  :.|..::||:..:      ::::.|.|:|:............||::...
  Fly   442 SELIRSNYTLINQEYLDYYPRELTVLTRNGSKDRFDYIQGLGKEGKFTTTSLIATMEYYNMMHWS 506

  Fly   641 NDAAQN--EHI----AVAVSRQHSFYNPRIQRDRLYCFDRRESLYVYLVTMLLPKKYHLLHQINP 699
            .....:  |||    .|...|:||...        :.|||:                        
  Fly   507 TSRLTHIKEHIFLYQMVIYLRRHSLLK--------FAFDRK------------------------ 539

  Fly   700 VIQHIIESGHMQKWARDLD---MRRMIHE--EITRVREDPFKALTFDQFRGAIAFSGGLLLVASC 759
             |:.::.:|.:..:.|:.|   .|:...|  |:|.:..|.|..|.:.          .|:.:::.
  Fly   540 -IKQLLSAGIIGYFVREFDACQYRKPFEEDYEVTPIPLDSFCGLYYI----------SLIWLSAA 593

  Fly   760 VFAFEL 765
            |.||.|
  Fly   594 VVAFIL 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir87aNP_650290.2 Periplasmic_Binding_Protein_Type_2 408..>475 CDD:304360 17/78 (22%)
Ir7aNP_572406.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.