DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir87a and Ir52c

DIOPT Version :9

Sequence 1:NP_650290.2 Gene:Ir87a / 41654 FlyBaseID:FBgn0038153 Length:796 Species:Drosophila melanogaster
Sequence 2:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster


Alignment Length:573 Identity:105/573 - (18%)
Similarity:197/573 - (34%) Gaps:177/573 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 LSSNSSEPEAIIEEFFRAKFEDKFPRDLSGCPLTASFRPWEPYIFRNSEEQ----PVDDYYYGLQ 364
            ||.|..:..   ||.:|...:.:..|.|  ..|....:|.....|.:.:||    .|.:.:|.|:
  Fly    90 LSCNFQDER---EENYRTLMKLQTSRRL--ILLKGHIKPESVCDFYSKKEQHNVAMVKENFYQLE 149

  Fly   365 -------GDEDDYNDTSPNYGESDDESYADPGEDGDGA-------------IPDTETQSGGKLKL 409
                   ..:.:|...:...|:|   .|.|...:..||             ||..::::|.: |.
  Fly   150 VVYSCRLFQDQNYEKLNLFDGKS---IYKDQFRNMHGAPIRTLSDKEPPRTIPYIDSKTGEE-KF 210

  Fly   410 SGIEYEMVQTIAERLHVSIEMQGENSNLYHLFQQLI--DGEIEMIVGGIDEDPSISQFVSSSIPY 472
            .|....::....::::.:::::          :.||  |.|:..:        .|:.|.|:.|. 
  Fly   211 KGYVGMLISQFVKKVNATMQIR----------EDLIKDDEEVSFV--------DITNFTSNDIL- 256

  Fly   473 HQDELTWCVARAKRRHGF-----------FNFVATFNADAGF------------LIGIFVVTC-- 512
               ::..|.||......:           :.|:|.......|            ||...::.|  
  Fly   257 ---DIGICEARTLEMSNYDAISYPYLMSSYCFMAPLPDSLPFSDVYMAIVAPSILIMFLIIFCIC 318

  Fly   513 -SLVVWLAQRVSGFQLRNLNGYFPTCLRVLGILLN----QAIPAQDFPI------TLRQLFALSF 566
             .|::::.:|    ..|:|.        :..:|:|    :...||.||.      .|:.:|.|..
  Fly   319 SVLIIYIQER----SYRSLT--------IRSVLMNDICLRGFLAQPFPFPRQYNRKLKLIFMLVC 371

  Fly   567 LMGFFFSNTYQSFLISTLTTPRSSYQIHTLQEIYSNKMTV---MGTSEHVRHLN---KDGEIFKY 625
            ......:..|.::|.:.|..|....::.:..::..::.|:   :...|.:..||   :|.||:.|
  Fly   372 FSSLISTTMYTAYLQAFLWGPPIEPRLTSFDDVKKSRYTMAINIYEREFLEALNVSLEDVEIYDY 436

  Fly   626 -----IREKFQMCYNL-VDCLNDAAQNEHIAVAVSRQHSFYNPRIQRDRLYC-------FDRRES 677
                 :|..|...|.. |..|.....||.  ..:.:...||         ||       ||    
  Fly   437 GKFSKLRSTFNTNYLFPVTALQWFTINEE--QKLFKYKIFY---------YCDAFCLNQFD---- 486

  Fly   678 LYVYLVTMLLPKKYHLLHQINPVIQHII---ESGHMQKWARDLDMRRMIHEEITRVREDPFKALT 739
                  .:.:|.:.||.:: :...:|::   |.|..:.|. |...|.||...:|..::  |..|.
  Fly   487 ------ILSIPLRRHLPYR-DIFEEHMLLQKEFGLTKYWI-DQSYRDMIRANLTTFKD--FSPLL 541

  Fly   740 FDQFRGA-----------IAFSGGLLLVASCVFAFEL---------CYVKYVY 772
            .:.:...           :....||     |.|..|:         |.:|..|
  Fly   542 ENDYIEVHNLYWVFTMYFVGMGMGL-----CFFILEILRPLRYWRNCKIKCEY 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir87aNP_650290.2 Periplasmic_Binding_Protein_Type_2 408..>475 CDD:304360 10/68 (15%)
Ir52cNP_725470.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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