DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yellow-e and yellow-f2

DIOPT Version :9

Sequence 1:NP_524344.1 Gene:yellow-e / 41653 FlyBaseID:FBgn0041711 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_650247.1 Gene:yellow-f2 / 41596 FlyBaseID:FBgn0038105 Length:452 Species:Drosophila melanogaster


Alignment Length:386 Identity:107/386 - (27%)
Similarity:167/386 - (43%) Gaps:34/386 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PGLQVAKQWKLLRYNFEP-----QAPVSDPN-FYNPQNVLITGLAVTDDRIFVATPKLFSGVPST 81
            ||....::.|::.....|     :|...||| .|.|.|.:..|......|:||..|:...|:|||
  Fly    63 PGKYSRRKRKIMTSRDTPVVVSSRADSDDPNASYIPYNNVPMGATHFRGRLFVTMPRRRVGIPST 127

  Fly    82 VSWVSKAQFGD--SPTLNAFPDWTFSNTGRSDFNCSDLILTSVYRLRVDSCNRIWLLDAGISRSL 144
            ::::..|:.|.  ||.|.|:|     |...:.||.|...|.||||..||:|.|:|.:|.|:....
  Fly   128 LNYIDLAEDGSNRSPKLRAYP-----NFALNQFNASAENLVSVYRTSVDACQRLWFIDTGMLEYP 187

  Fly   145 EDYEITCPPKILVVDLATDRVVRRIDFPPEVLRGESLFTNMVIDETTAKGCDDVFVYITDTVEPG 209
            .:.:....|.|.|||||||:|::|.|.|..:........::.:| ..|..|.|.:.||.|.|...
  Fly   188 NNRQQIRRPSIWVVDLATDQVLKRFDVPESIAETGRGLASITVD-VKAGQCGDAYAYIPDLVYRR 251

  Fly   210 IIVYDSGKDVTWRVSHPAMYPDPDFAQSEIHEHRFVLMDGVVGLTFD----ERTGVVYFQPLATD 270
            :.||....|..|...|.....||......|....|...||:..:|..    :.:...||.|:|:.
  Fly   252 LYVYHLRNDRIWSFEHNYFNFDPLSGDLSIGGQTFRWDDGIFSITLGAQKLDGSRDAYFHPMAST 316

  Fly   271 RVFSVHKNVLR----AGPLPDGKMLDVKLVGKK--SSQGIGLAVSPFDSSLIFSPLSETAIASWN 329
            ..|.|...||:    |.....|.  |.:::|.:  |:|....|..|....:.|..:....:..|.
  Fly   317 NEFVVSNRVLQQESNAARSDHGN--DFRVLGSRGPSTQSTMHAYDPGTGVIFFDEIQRNGVGCWK 379

  Fly   330 PT-----TNQQSVLAFDRDQLQFVADITTTKSEPGVIYAIASKFHRFFLKNLNPNEFNNRI 385
            .:     .|..||.:...|.: :.:|::.  .|.|.|:.:::....|....|:.:.:|.||
  Fly   380 TSKPISAENYGSVDSNAEDMI-YPSDLSI--DEDGTIWVMSNSMPIFIYSTLDTSIYNFRI 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-eNP_524344.1 MRJP 120..393 CDD:281074 75/281 (27%)
yellow-f2NP_650247.1 MRJP 163..451 CDD:281074 75/281 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449243
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D940689at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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