DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-e and yellow-b

DIOPT Version :9

Sequence 1:NP_524344.1 Gene:yellow-e / 41653 FlyBaseID:FBgn0041711 Length:530 Species:Drosophila melanogaster
Sequence 2:NP_001285987.1 Gene:yellow-b / 35005 FlyBaseID:FBgn0032601 Length:453 Species:Drosophila melanogaster


Alignment Length:452 Identity:124/452 - (27%)
Similarity:214/452 - (47%) Gaps:46/452 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIRILVGVICAVLWSPVSQALTPGLQVAKQWKLLRYNF---EPQAPVSDPNFYNPQNVLITGLAV 62
            |:|..:|::  :||: ||......|:||.:|:.:.:.:   :.:....:...:.|.||:..||.|
  Fly     1 MLRFRLGLL--LLWA-VSALANDNLRVAYEWREMDFKYANPDQRWSAIERGEFKPANVIPFGLEV 62

  Fly    63 TDDRIFVATPKLFSGVPSTVSWV------SKAQFGDSPTLNAFPDWTFSNTGRSDFNCSDLILTS 121
            ...|:||..|:...|||::::::      ||     .|.|..||.|...|...::..     |.|
  Fly    63 AGHRLFVTLPRWRDGVPASLAYLDLNDTSSK-----GPALKPFPSWQAHNLQEAEPE-----LVS 117

  Fly   122 VYRLRVDSCNRIWLLDAGISRSLEDYEITCPPKILVVDLATDRVVRRIDFPPEVLRGESLFTNMV 186
            .:|:|.|.|.|:|:||:.||..||..:|....::||.||..|.::||...|...|:..||..|:.
  Fly   118 PFRVRADRCGRLWVLDSRISGVLEQTKIYGAAQLLVYDLHNDDLLRRHVLPAGQLKQGSLLANLA 182

  Fly   187 IDETTAKGCDDVFVYITDTVEPGIIVYDSGKDVTWRVSHPAMYPDPDFAQSEIHEHRFVLMDGVV 251
            ::::   .|::.|.|..|...||::||....:.:|||.|...:|||......|:...|...||:.
  Fly   183 VEDS---DCENTFAYAADLGSPGLVVYSWKDEESWRVQHHFFHPDPMAGNFSINGIEFQWDDGLY 244

  Fly   252 GLTFDE--RTG--VVYFQPLATDRVFSVHKNVLRAGPLPDGKML--DVKLVGKK--SSQGIGLAV 308
            ||...:  .||  .:||.||.:...|||..::||...|....|:  :.|::|.:  ::|.....:
  Fly   245 GLALSKPLETGYATLYFHPLCSTTEFSVDTSILRNKTLATSPMIYREFKVLGSRGPNTQAGAEFL 309

  Fly   309 SPFDSSLIFSPLSE-TAIASWNPTT----NQQSVLAFDRDQLQFVADITTTKSEPGVIYAIASKF 368
            .| |:.::|..|.. ..:|.|...|    :.||.:..:.|.|.|.:||.....:.  ::.::::.
  Fly   310 DP-DTGVLFYALPNLNEVACWRTATDFSHSSQSRIHMNNDTLVFPSDIKVDDQKR--LWVLSNQL 371

  Fly   369 HRFFLKNLNPNEFNNRIVRLELPAG--NSLLGHRVALPAPPTHNSLLNYGVFNTHGQASTNA 428
            ..|....|.....|.||:...:...  |:....|.: |.|...|.|.:  :.||:.:..:|:
  Fly   372 PVFIYDELYAGSINFRILTASVKEAIENTACEIRTS-PLPDVINKLGD--ILNTNIKLKSNS 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-eNP_524344.1 MRJP 120..393 CDD:281074 82/285 (29%)
yellow-bNP_001285987.1 MRJP 116..402 CDD:281074 83/291 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449234
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D940689at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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