DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment yellow-e2 and yellow-h

DIOPT Version :9

Sequence 1:NP_650289.2 Gene:yellow-e2 / 41652 FlyBaseID:FBgn0038151 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_651912.3 Gene:yellow-h / 43779 FlyBaseID:FBgn0039896 Length:463 Species:Drosophila melanogaster


Alignment Length:440 Identity:132/440 - (30%)
Similarity:221/440 - (50%) Gaps:46/440 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LNPPKTIFPDFKFPSDYRDT--------------PIVFEWKNLQYGFPSEQERDQVLRNGRYNPD 72
            ||...::.|.|:....|..|              .||:|||.|.:.:.:..:|.|.:.||.:.|.
  Fly    20 LNGNLSVQPVFQTLDGYEYTSQSFSQNLQSESQLEIVYEWKYLDFLYSTFVQRQQSILNGDFVPK 84

  Fly    73 SPIPIDIDVYYPPNGGPPRHFVTSPRFGQGVPFSLGYVTNVQRENGSEIQAYPSYQWHSS-HGAN 136
            :.:|:.|||:   |.   |.|||:||:..|||.|||.:....:|:...|:.||:::.|.: :..:
  Fly    85 NNLPLGIDVH---NN---RLFVTTPRWKNGVPASLGTLPFPPKESSPAIKPYPNWEAHGNPNNPD 143

  Fly   137 CDGLTSVYRVHIDACGQMWVLDSG----EIEFVQHCAPQVMVFDLATDQLIHRYRLPETSYKAKV 197
            |..|.||||..:|.|.::|::|||    .|...|.|.|:::|:||.:|:||.||.| |.|:..:.
  Fly   144 CSKLMSVYRTAVDRCDRIWLIDSGIVNATINLNQICPPKIVVYDLKSDELIVRYNL-EASHVKQD 207

  Fly   198 SRFVNIFADIRDPPPSGQCKDVFAYLADPTSKAIVVYDVVGQSSWRIENKFTYPDAKFGTHTVAG 262
            |...||..||.:     .|.|..|.::|.....::||.:....|||:.|...|||.......|.|
  Fly   208 SLHSNIVVDIGE-----DCDDAHAIVSDVWRFGLLVYSLSKNRSWRVTNYNFYPDPFASDFNVYG 267

  Fly   263 ESFELLDGPLALATTPLGLGLRRHLIFHALSNELELAIPLDILNNATNWQKGLSSSLSEFTVLGK 327
            .:|:.|||...::.......:.|.|.||.:::..|..:|::||.|.:.||.........|..:|.
  Fly   268 LNFQWLDGVFGMSIYYNKKIMERVLYFHPMASFKEFMVPMNILLNESVWQTNTQEYAKYFIPIGD 332

  Fly   328 RGI--QCASHAISRQGFLFCGFLEPIGIFGWDIRRPYNR------ENVKLLAINPATLQFVSGMK 384
            ||.  |.::..::|.|.:|...:....|..||..:||.|      .|::    |...:||.:.:|
  Fly   333 RGYNSQSSTSGVTRNGIMFFTQVHQDDIGCWDTSKPYTRAHLGKFHNME----NSNLIQFPNDLK 393

  Fly   385 IVRRPADGREELWLLSDRLQKIFAGTIDYREINYRVMRCDVDDLLQGRGC 434
            :.:   :..:.:||:|:||.......:||.|:|:|:::.:|:.:::...|
  Fly   394 VDK---EKDQNVWLISNRLPIFLYSNLDYGEVNFRILKANVNKIIRNSVC 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-e2NP_650289.2 MRJP 141..434 CDD:281074 90/304 (30%)
yellow-hNP_651912.3 MRJP 148..440 CDD:281074 90/304 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449220
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D202564at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.