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Protein Alignment yellow-e2 and smp-30
DIOPT Version :9
Sequence 1: | NP_650289.2 |
Gene: | yellow-e2 / 41652 |
FlyBaseID: | FBgn0038151 |
Length: | 435 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001262580.1 |
Gene: | smp-30 / 41786 |
FlyBaseID: | FBgn0038257 |
Length: | 306 |
Species: | Drosophila melanogaster |
Alignment Length: | 101 |
Identity: | 23/101 - (22%) |
Similarity: | 33/101 - (32%) |
Gaps: | 30/101 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 68 RYNPDSPI-----PIDID--VYYPP-NGGP-----------------PRHFVTSPRFGQGVPFSL 107
:..|:.|: .:|.| :|... |||. |...:||..|| |....:
Fly 207 KIRPEGPLFPDGMTVDTDGNIYVATFNGGTVFKVNPSTGKILLEIKIPTTQITSVAFG-GPNLDI 270
Fly 108 GYVTNVQRENGSEIQAYPSYQWHSSHGANCDGLTSV 143
.|||...:.: |..|:.......|.|..|...|
Fly 271 LYVTTANKFD----QPKPAGTTFQVTGLNAKGYAGV 302
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
yellow-e2 | NP_650289.2 |
MRJP |
141..434 |
CDD:281074 |
1/3 (33%) |
smp-30 | NP_001262580.1 |
SGL |
18..277 |
CDD:285626 |
17/70 (24%) |
NHL |
168..>248 |
CDD:302697 |
8/40 (20%) |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.