DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-e2 and smp-30

DIOPT Version :9

Sequence 1:NP_650289.2 Gene:yellow-e2 / 41652 FlyBaseID:FBgn0038151 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001262580.1 Gene:smp-30 / 41786 FlyBaseID:FBgn0038257 Length:306 Species:Drosophila melanogaster


Alignment Length:101 Identity:23/101 - (22%)
Similarity:33/101 - (32%) Gaps:30/101 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RYNPDSPI-----PIDID--VYYPP-NGGP-----------------PRHFVTSPRFGQGVPFSL 107
            :..|:.|:     .:|.|  :|... |||.                 |...:||..|| |....:
  Fly   207 KIRPEGPLFPDGMTVDTDGNIYVATFNGGTVFKVNPSTGKILLEIKIPTTQITSVAFG-GPNLDI 270

  Fly   108 GYVTNVQRENGSEIQAYPSYQWHSSHGANCDGLTSV 143
            .|||...:.:    |..|:.......|.|..|...|
  Fly   271 LYVTTANKFD----QPKPAGTTFQVTGLNAKGYAGV 302

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
yellow-e2NP_650289.2 MRJP 141..434 CDD:281074 1/3 (33%)
smp-30NP_001262580.1 SGL 18..277 CDD:285626 17/70 (24%)
NHL 168..>248 CDD:302697 8/40 (20%)