DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-e3 and yellow-d

DIOPT Version :9

Sequence 1:NP_650288.1 Gene:yellow-e3 / 41651 FlyBaseID:FBgn0038150 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_523820.2 Gene:yellow-d / 37703 FlyBaseID:FBgn0041712 Length:432 Species:Drosophila melanogaster


Alignment Length:419 Identity:146/419 - (34%)
Similarity:208/419 - (49%) Gaps:40/419 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LVVLLALFCAVQGQAL--------VLKELHTLHQWTNLSLG--------DDLSKGN----RFLPV 46
            |.:||..|.....|:.        .::.:.||.||..|..|        :..:.||    ...|:
  Fly     6 LRILLIAFSLTLAQSYGVGVNGPRPVRTVETLTQWGQLEFGFPTAQDRENAQAAGNLVPENGTPI 70

  Fly    47 DVDIEYGDEGRHRTFLTIPRLGMATPFTLATVIAEHNELVENPRLEPYPNEEWH-VPPNNCSGIT 110
            ||..:|...|:.|.|.||||.....|:|||||.|....  ..|.|:||||..|| ....:|..||
  Fly    71 DVQPQYMANGQIRLFTTIPRFVTGIPYTLATVSATQGR--NGPLLQPYPNYSWHNANGEDCDRIT 133

  Fly   111 SAIRTYIDECWRLWVVDSGQVNSLQLCPPQILTFDLVKDELVQRHALPPDSYIPSVSIF---TAL 172
            ||.|..|.||.::||:|||.:.:.||||||:|.|.|..|.|:.|...|.|:||||.|:|   ..|
  Fly   134 SAFRVAITECNQMWVIDSGVIGTTQLCPPQLLQFALATDRLLHRFRFPNDTYIPSGSLFITPNVL 198

  Fly   173 VVDLAERGTPNRCVGGRAYIADAWGYGLIVFDSLTGRSWRIEHESMKPSP----LLRLGRSSNSQ 233
            |.|...|||.:|.:   .|:||...:||:|:|.....|||.|:..|.|.|    ....|.|....
  Fly   199 VQDPPPRGTCSRTM---IYVADVSYHGLVVYDHQAQTSWRAENRFMYPDPDYGKHTIAGESFYLM 260

  Fly   234 AGIFTVSLSPSEVEDRFLYFHTLNSFNEMRVPLSLINNETFWKSA-NASRDSFHSLGTRGIQCES 297
            .|:|.::     .:.|.||||.|.|.:|..||||.:|.:..|.:. .|..:.|..||.|..:|.:
  Fly   261 DGMFALN-----NDKRNLYFHPLASASEYSVPLSALNRQQNWANGPEALPEEFRLLGRRRSECAA 320

  Fly   298 EVMDQSGNLYCSLISLGALVKWEESVSNYTADDLRVVAYNPHKIKFVTGLKINRNSKGEEELWAL 362
            ..:|...|:||...:...|..|..: |.|.:.:...:......::||:|:|:.||.:|:||||.|
  Fly   321 SAIDGRNNVYCVTFNPVKLFVWNVN-SPYNSRNFGNLPAKSDDLQFVSGMKVLRNREGQEELWML 384

  Fly   363 SSQPKLFVGGDLPANEVKFQIIGCRTADL 391
            |::.:....|.|.:.||.|:|:..:..|:
  Fly   385 SNRYQKIAAGTLNSKEVNFRILRRKLDDV 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-e3NP_650288.1 MRJP 110..397 CDD:281074 105/290 (36%)
yellow-dNP_523820.2 MRJP 133..413 CDD:281074 104/288 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449192
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D202564at33208
OrthoFinder 1 1.000 - - FOG0012723
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10009
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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