DRSC/TRiP Functional Genomics Resources

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Protein Alignment GILT1 and ifi30

DIOPT Version :9

Sequence 1:NP_650287.3 Gene:GILT1 / 41650 FlyBaseID:FBgn0038149 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001006057.1 Gene:ifi30 / 336503 ZFINID:ZDB-GENE-030131-8447 Length:255 Species:Danio rerio


Alignment Length:225 Identity:66/225 - (29%)
Similarity:103/225 - (45%) Gaps:27/225 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SHKIAAVC-LLMSCLIATAYSAA-KVPISIYYESLCPDSAKFITEQVYPAVKGELRDVVELTFVP 64
            |..|||.| :|..|:...:..|| ||.:|:|||||||....|:|.|:.|.:. .|:|::|:..||
Zfish    37 SEDIAAECGVLEQCMKYNSTKAADKVKVSLYYESLCPGCRMFLTSQLVPTLI-MLQDIMEIDLVP 100

  Fly    65 FGKSQFVTQGSEVTFTCHHGPNECYGNKVHACAIEHIQANSYQVEYTRESLTMDFINCLMKA--- 126
            :|.:|......:..|||.||.:||.||.:..|.:..:..::..|.:..||     .|.::|:   
Zfish   101 YGNAQETQAQGKYIFTCQHGEDECLGNMIETCMLNKLGLDAVMVIFCMES-----GNDVLKSAQP 160

  Fly   127 --GKNFPDNVYPGQRCASENHINNWENIKTCANSTEGSVLLRKAGESTMRLKEPLTSVPTILFNE 189
              |...||              ..|::|..|....:|:.|:.:....|..|..|...||.|..|.
Zfish   161 CLGVYRPD--------------VTWDSIMQCVKGDQGNKLMHENAVKTDALNPPHQYVPWITVNG 211

  Fly   190 QFDKKVNDRAQVNLVGTICQYVSAPQPRIC 219
            :....:.|:|..:|...:|......:|..|
Zfish   212 EHTDDLQDKAMGSLFSLVCSLYKGQKPAAC 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GILT1NP_650287.3 GILT 26..143 CDD:308710 37/121 (31%)
ifi30NP_001006057.1 SapA <31..52 CDD:321954 7/14 (50%)
GILT 63..162 CDD:308710 34/104 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 44 1.000 Domainoid score I12298
eggNOG 1 0.900 - - E1_KOG3160
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 102 1.000 Inparanoid score I4959
OMA 1 1.010 - - QHG57849
OrthoDB 1 1.010 - - D477702at33208
OrthoFinder 1 1.000 - - FOG0000773
OrthoInspector 1 1.000 - - otm25897
orthoMCL 1 0.900 - - OOG6_101707
Panther 1 1.100 - - O PTHR13234
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2953
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.870

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