DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9799 and AT4G04940

DIOPT Version :10

Sequence 1:NP_650284.2 Gene:CG9799 / 41647 FlyBaseID:FBgn0038146 Length:922 Species:Drosophila melanogaster
Sequence 2:NP_567275.1 Gene:AT4G04940 / 825833 AraportID:AT4G04940 Length:910 Species:Arabidopsis thaliana


Alignment Length:933 Identity:303/933 - (32%)
Similarity:504/933 - (54%) Gaps:66/933 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IFRRNRALGYVSNQVPAVTRYVQR-RRDTLLITCIGRSFQVYTANHFRLLHVSGLHPDEITALAT 88
            ||...||:||:::.||.   .||| ..:|.:...:|::||:|......|:.:|...|.:|.|||:
plant     3 IFEPFRAIGYITSTVPF---SVQRLGTETFVTVSVGKAFQIYNCAKLNLVIISPQLPKKIRALAS 64

  Fly    89 DRLHTYTASNKCIYAWRAGKHIRHVYRGHQKDVHLLLPFGSSLIAIDRQNVLKVWNISTEDVYLE 153
            .|.:|:.|....|..:|....:. .:..|...|.|||.||..::::|.:..:.:|.....:.:| 
plant    65 YRDYTFVAFGNEIAVFRRAHQVA-TWSKHVAKVDLLLVFGEHVLSLDVEGNMFIWAFKGIEEHL- 127

  Fly   154 VPF----RSEEFQITAVTHPPTYINKIVLGSQQGQLKILNIKKNSVVCTLSHHDSRITCIEPSPA 214
            .|.    .:.:|..|::.||.||:||:::|||:|.|::.||....::.......|.:|....|||
plant   128 APIGNLQLTGKFTPTSIVHPDTYLNKVLVGSQEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPA 192

  Fly   215 LDVVAVGHGDGTIILLNLKFDEVLMSFQQ-DWGQVTNLSFRTDGPPILVSACSNGYMAFWNLEER 278
            |||||:|..||.|.:.|:|.||.:::|:. ..|.||.|||.|||.|:|.|..|.|.::.|||.::
plant   193 LDVVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKK 257

  Fly   279 KLAGQLQ-AHEESVTTAICLPSEPVVFTTSPDNSMRMFVFDMPDGGARQLRIREGHTKPPFCIRY 342
            :|...:: ||:.|:.:...|.:|||:.:.|.|||::|::||..||..|.||.|.||:.||.|||:
plant   258 RLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRF 322

  Fly   343 HGSSGVSILSSGEDSTMRVFSTISESLNKSMGRATYNPKATKKKNRFEHDKFGMPPILEFTSDTA 407
            : |:|..|||:|:|...|:||.|.|..::.:.:...:.:|  ||.|.:.::..:.|::.|.....
plant   323 Y-SNGRHILSAGQDRAFRLFSVIQEQQSRELSQRHISRRA--KKLRLKEEELKLKPVVSFDCAEI 384

  Fly   408 REKEWDNIAAIHAGVIQTTTWSFGKNRMGEHRLVPKQFQNSNRTNFQNET---TCIVLTHCGNFV 469
            ||::|.|:...|....:...|......:|||.|.|..         :|.|   .| .::.||||.
plant   385 RERDWCNVVTCHMDTAEAYVWRLQNFVLGEHILKPCP---------ENPTPIKAC-AISACGNFA 439

  Fly   470 IIGYSSGDIERFNIQSGLHRATYGSP------AHKMAVRGLASDNLNQTVISGCSEGLLKFWSFK 528
            ::|.:.|.|||||:|||:.|.:|...      ||...|.|:|.|:.|..:||....|.||.|.||
plant   440 VVGTAGGWIERFNLQSGISRGSYFDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFK 504

  Fly   529 GKVDKPLATLRLADGIALIR--QHRESSMLAIGLETFKIFVVDMHTRVIVRKFVGHTAKLNDLTF 591
            .:..|....:    |.:|::  .||.:.:||...:.|.|.:.|:.|..:||:|.|||.::.||.|
plant   505 KRELKSQWDV----GCSLVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCF 565

  Fly   592 SPDSRWLITAAMDSTIKVWDIPSSYMVDHFRVEAPCVSLSMSPNGDFLATAHVGLLGIYLWANKT 656
            |.|.:|:|:::||.::::||:..:..:|...|:.|..:||:|||.|.|||||....|:|||.|::
plant   566 SEDGKWVISSSMDGSLRIWDVILAKQIDGVHVDVPITALSLSPNMDVLATAHSDQNGVYLWVNQS 630

  Fly   657 LFNQI-SLRSIDPLEPAPYVGLPT-NVCDAMELEDGMKELEIDEEDESKLGELVDTKYETPTQLS 719
            :|:.: |:.|....:....|.||: :...:.|.:|.|....::..:..:......::.:.|    
plant   631 MFSGLPSVESYASGKDVVNVKLPSVSALTSSEADDDMDRQVLENSEALQASSFSISQKQIP---- 691

  Fly   720 EELITLSGLAASRWQNLLDLELIKQRNKPKAPPKAPKQAPFFLPTVSGL--ELRFDVENGQK--E 780
             ||:|||.|..|:||:|::|::||.||||..|||.|::||||||::..|  ::.|...:.:.  |
plant   692 -ELVTLSLLPKSQWQSLINLDIIKARNKPIEPPKKPEKAPFFLPSIPSLSGDILFKANDSEADGE 755

  Fly   781 EDESRIRKASTLNNLTA----FGQLLEETADSLDFASAVAHLTQLGPSMVDFEIKSLH---PEAG 838
            .:|:..:..:::.|..|    |.:.|:.:.||..|.....::..|.||.:|.|::.|.   .:..
plant   756 NEENNKKDQNSMKNFDALESPFSKHLKSSWDSKHFLDFTNYMKSLSPSALDMELRMLEIIDEDVE 820

  Fly   839 GTLLAMLQFLKLVKFM------FGTNLNFELAQSYLSVFLRSHGLGLTEFPDLVKELRTVSQVQQ 897
            ..|:...:|:.:.:.:      .....:||..|:.:.:||:.||..:...|.|.::.:.:.:.|.
plant   821 EELIKRPEFILIGQLLDYFINEVSCKNDFEFMQAVVKLFLKIHGETIRCHPSLQEKAKKLLETQS 885

  Fly   898 EAWQRVEEKLIYGTG-VVAALRN 919
            ..||:: |||...|. :|..|.|
plant   886 LVWQKM-EKLFQSTRCIVTFLSN 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9799NP_650284.2 WD40 repeat 84..116 CDD:293791 8/31 (26%)
WD40 111..372 CDD:475233 102/266 (38%)
WD40 repeat 162..201 CDD:293791 14/38 (37%)
WD40 198..642 CDD:441893 166/456 (36%)
WD40 repeat 206..242 CDD:293791 17/35 (49%)
WD40 repeat 249..285 CDD:293791 16/35 (46%)
WD40 repeat 291..331 CDD:293791 16/39 (41%)
WD40 repeat 337..364 CDD:293791 13/26 (50%)
WD40 repeat 408..447 CDD:293791 11/38 (29%)
WD40 repeat 458..496 CDD:293791 17/43 (40%)
WD40 repeat 502..540 CDD:293791 13/37 (35%)
WD40 repeat 545..580 CDD:293791 11/36 (31%)
WD40 repeat 587..622 CDD:293791 12/34 (35%)
Utp21 717..918 CDD:461219 63/218 (29%)
AT4G04940NP_567275.1 WD40 repeat 135..179 CDD:293791 15/43 (35%)
WD40 154..586 CDD:441893 161/448 (36%)
WD40 repeat 184..220 CDD:293791 17/35 (49%)
WD40 repeat 228..264 CDD:293791 16/35 (46%)
WD40 repeat 271..310 CDD:293791 16/38 (42%)
WD40 repeat 318..357 CDD:293791 15/39 (38%)
WD40 repeat 376..405 CDD:293791 6/28 (21%)
WD40 repeat 428..472 CDD:293791 17/44 (39%)
WD40 repeat 477..503 CDD:293791 11/25 (44%)
WD40 repeat 516..554 CDD:293791 11/37 (30%)
WD40 549..>626 CDD:475233 33/76 (43%)
WD40 repeat 560..593 CDD:293791 11/32 (34%)
Utp21 689..906 CDD:461219 64/222 (29%)

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