DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Droj2 and Dnaja4

DIOPT Version :10

Sequence 1:NP_650283.1 Gene:Droj2 / 41646 FlyBaseID:FBgn0038145 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001020582.1 Gene:Dnaja4 / 300721 RGDID:1310035 Length:555 Species:Rattus norvegicus


Alignment Length:407 Identity:246/407 - (60%)
Similarity:314/407 - (77%) Gaps:14/407 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVKETGYYDILGVKPNATPDELKKAYRKLALKYHPDKNPNEGEKFKAISQAYEVLSDADKRQVYD 65
            |||||.|||||||||:|:|:|:|||||||||||||||||:||||||.||||||||||..||.:||
  Rat   159 MVKETQYYDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIYD 223

  Fly    66 EGGEAAIKKGGADSGDFRNPMDFFEKFFGAGFGGSGGGR-RRERRGKDVVHQMSVQLEELYNGAT 129
            :|||.|||:||:.|..|.:|||.|:.|||      |||| .||||||:||||:||.||:||||.|
  Rat   224 QGGEQAIKEGGSGSPSFSSPMDIFDMFFG------GGGRMTRERRGKNVVHQLSVTLEDLYNGIT 282

  Fly   130 RKLQLQKNVICDKCEGRGGKKGSIEKCLQCRGNGVETRVQQIAPGIMQHIEQVCRKCSGTGETIQ 194
            :||.||||:||:||||.||||||:|||..|:|.|::..:|||.||::|.|:.||.:|.|.||.|.
  Rat   283 KKLALQKNIICEKCEGIGGKKGSVEKCPLCKGRGMQIHIQQIGPGMVQQIQTVCIECKGQGERIN 347

  Fly   195 EKDRCKNCSGRKTVRERKVLEVHIEKGMRDGQKIVFTGEGDHEPESQPGDIIILLDEKEHSTFAH 259
            .||||::|||.|..||:|::|||::|||:|||||:|.||||.|||.:|||:||:||:|:||.|..
  Rat   348 PKDRCEDCSGAKVTREKKIIEVHVDKGMKDGQKILFHGEGDQEPELEPGDVIIVLDQKDHSVFQR 412

  Fly   260 AGQDLMMKMPLQLVEALCGFQRIVKTLDDRDLIVSTQPGEVIRHEMTKCIAEEGMPIFKNPMEKG 324
            .|.||:|||.:||.||||||::.:||||||.||:|::.||||:|...||:..|||||:|.|:|||
  Rat   413 RGHDLIMKMKIQLSEALCGFKKTIKTLDDRVLIISSKSGEVIKHGDLKCVRNEGMPIYKAPLEKG 477

  Fly   325 TLIIQFEVIFPEV--INPSVVPTLKQCLPPAPEVDIPIDAEQTVLEDFDPKQRRQQHQRMAYDED 387
            .|||||.|:|||.  ::...:|.|:..|||..:|.|..|.:|..|::|:|.::..:..|.||:||
  Rat   478 MLIIQFLVVFPEKQWLSLEKLPQLEALLPPRQKVRITDDMDQVELKEFNPNEQSWRQHREAYEED 542

  Fly   388 DGGYQDGPRV-QQCTSS 403
            |    ||||. .||.::
  Rat   543 D----DGPRAGVQCQTA 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Droj2NP_650283.1 PTZ00037 2..398 CDD:240236 243/399 (61%)
Dnaja4NP_001020582.1 PHA03247 8..>126 CDD:223021
PTZ00037 144..552 CDD:240236 244/402 (61%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.