DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8870 and CG12133

DIOPT Version :9

Sequence 1:NP_731802.1 Gene:CG8870 / 41645 FlyBaseID:FBgn0038144 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_610540.2 Gene:CG12133 / 36036 FlyBaseID:FBgn0033469 Length:340 Species:Drosophila melanogaster


Alignment Length:342 Identity:133/342 - (38%)
Similarity:171/342 - (50%) Gaps:37/342 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PRTRAVMNSSRKNIIGLRRCGTNK----------VCCPKWE-TYLPHD-TCGQSRRKPTK----G 87
            ||.   |.:.:|:....:.|..|.          .|||... ..||.. .||||  .|:.    |
  Fly     6 PRN---MTNDQKSQYRNKLCNINPFAHELVHMVFTCCPMVAGDKLPDSRVCGQS--PPSSYIVGG 65

  Fly    88 KIPALNEFPWMAMLLYGNKNNLSQKLVPKCGGSLINNWYVLTAAHCVEYPFMDYPYALKTVRLGE 152
            .....|:|||..:|.| ......|:..|.|.||||.:.||||||||:..    ..:.:..|||||
  Fly    66 MEAQSNQFPWTVLLGY-EAYTAKQRPSPMCAGSLIASRYVLTAAHCLNV----NDFYVARVRLGE 125

  Fly   153 HNTSTNPDRA-IVNGRRQYAPLYMEIEVDQIITHEQ-FNRGRRLINDIALVRLKFPVRYTRAIQP 215
            |:|..:||.. :.||.:.:||.:::|:||..:.||| :.|..|..|||||:|||..|:||..|:|
  Fly   126 HDTENDPDYTWLPNGAKIWAPAHVDIDVDLRVPHEQYYTRNGRHYNDIALLRLKSRVKYTLQIRP 190

  Fly   216 ICLPRAQKLAAHKRK---FQASGWPDMGQGIASEVLLRSFIAERHPDVCKSNYDFNL---GSQIC 274
            ||:....:|:....|   ||.:||.|.|....|.||.:..|:...||.|.:.|...|   ..|||
  Fly   191 ICIWPGIELSTSSFKNFPFQIAGWGDSGLQQKSTVLRQGTISGMSPDECLNRYPTLLVDKDIQIC 255

  Fly   275 AGGLDGNDTSPGDSGGPLMETVIRGKVTLTYAAGIISYGQKPCVLKTCKPAFYTKTSYFFEWIKS 339
            |.|.||.||..||||.|||.:|.||.....|.|||.|||..|... ...||.|||||.::||||.
  Fly   256 AMGWDGTDTGLGDSGSPLMASVGRGADQFYYLAGITSYGGGPSSY-GYGPAVYTKTSSYYEWIKK 319

  Fly   340 KLQSPFIDSDSKSRTRK 356
            |:..  |..|.:....|
  Fly   320 KIND--IAEDERKMKYK 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8870NP_731802.1 Tryp_SPc 93..340 CDD:238113 112/254 (44%)
Tryp_SPc 93..337 CDD:214473 109/251 (43%)
CG12133NP_610540.2 Tryp_SPc 62..320 CDD:238113 113/263 (43%)
Tryp_SPc 62..317 CDD:214473 110/260 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463189
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D88822at6656
OrthoFinder 1 1.000 - - FOG0003849
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

Return to query results.
Submit another query.