DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8870 and Jon25Biii

DIOPT Version :9

Sequence 1:NP_731802.1 Gene:CG8870 / 41645 FlyBaseID:FBgn0038144 Length:356 Species:Drosophila melanogaster
Sequence 2:NP_608881.1 Gene:Jon25Biii / 33706 FlyBaseID:FBgn0031653 Length:258 Species:Drosophila melanogaster


Alignment Length:239 Identity:57/239 - (23%)
Similarity:87/239 - (36%) Gaps:66/239 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 CGGSLINNWYVLTAAHCVEYPFMDYPYALKTVRLGEHNTSTNPDRAIVNGRRQYAPLYMEIEVDQ 181
            ||||:|.:.:||||.||:........|...|.|.....|.|     :.||              .
  Fly    62 CGGSIIAHDWVLTAEHCIGDAASVIVYFGATWRTNAQFTHT-----VGNG--------------N 107

  Fly   182 IITHEQFNRGRRLINDIALVRLKFPVRYTRAIQPICLPRAQKLAAHKRKFQ--------ASGW-- 236
            .|.|..        .||||:|:.. |.:...:..:.||      ::..::.        |.||  
  Fly   108 FIKHSN--------ADIALIRIPH-VDFWHMVNKVELP------SYNDRYNNYNEWWAVACGWGG 157

  Fly   237 -------PDMGQGIASEVLLRSFIAERHPDVCKSNYDFNLGSQICAGGLDGNDTSPGDSGGPLME 294
                   ||..|.:..:::        |.:.|...|.....:.||...:||.....|||||||  
  Fly   158 TYDGSPLPDWLQCVDLQIV--------HNEECGWTYGSVGDNVICTRTVDGKSICGGDSGGPL-- 212

  Fly   295 TVIRGKVTLTYAAGIISYGQKPCVLKTCKPAFYTKTSYFFEWIK 338
             |......|...:..:|  ...|  ::..||.:.:.:|..:||:
  Fly   213 -VTHDGSKLVGVSNFVS--SNGC--QSGAPAGFQRVTYHLDWIR 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8870NP_731802.1 Tryp_SPc 93..340 CDD:238113 57/239 (24%)
Tryp_SPc 93..337 CDD:214473 55/236 (23%)
Jon25BiiiNP_608881.1 Tryp_SPc 36..250 CDD:214473 55/236 (23%)
Tryp_SPc 37..253 CDD:238113 57/239 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45435794
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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