DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8870 and Tmprss3

DIOPT Version :10

Sequence 1:NP_731802.1 Gene:CG8870 / 41645 FlyBaseID:FBgn0038144 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:263 Identity:83/263 - (31%)
Similarity:129/263 - (49%) Gaps:40/263 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 GKIPALNEFPWMAMLLYGNKNNLSQKLVPKCGGSLINNWYVLTAAHCVEYPFMDYPYALKTVRLG 151
            |.:.:|.::||...|.:...:        .||||:|...:::|||||| |..  |.....||::|
  Rat   220 GNVSSLTQWPWQVSLQFQGYH--------LCGGSVITPLWIVTAAHCV-YDL--YHPKSWTVQVG 273

  Fly   152 EHNTSTNPDRAIVNGRRQYAPLYMEIEVDQIITHEQFNRGRRLINDIALVRLKFPVRYTRAIQPI 216
            ..:...:|           .|.::   |::||.|.:: :.:||.|||||::|..|:.:...||||
  Rat   274 LVSLMDSP-----------VPSHL---VEKIIYHSKY-KPKRLGNDIALMKLSEPLTFDETIQPI 323

  Fly   217 CLPRAQKLAAHKRKFQASGW--PDMGQGIASEVLLRSFIAERHPDVCKSNYDFNLG----SQICA 275
            |||.:::.....:....|||  .:.|.|.||.||..:.:......:| ::.|...|    |.:||
  Rat   324 CLPNSEENFPDGKLCWTSGWGATEDGAGDASPVLNHAAVPLISNKIC-NHRDVYGGIISPSMLCA 387

  Fly   276 GGLDGN-DTSPGDSGGPLMETVIRGKVTLTYAAGIISYGQKPCVLKTCKPAFYTKTSYFFEWIKS 339
            |.|.|. |:..|||||||:....|    |....|..|:| ..|. :..||..||:.:.|.:||..
  Rat   388 GYLKGGVDSCQGDSGGPLVCQERR----LWKLVGATSFG-IGCA-EVNKPGVYTRITSFLDWIHE 446

  Fly   340 KLQ 342
            :|:
  Rat   447 QLE 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8870NP_731802.1 Tryp_SPc 93..340 CDD:238113 80/253 (32%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747
Tryp_SPc 216..444 CDD:214473 80/256 (31%)
Blue background indicates that the domain is not in the aligned region.

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