DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8870 and Tmprss2

DIOPT Version :10

Sequence 1:NP_731802.1 Gene:CG8870 / 41645 FlyBaseID:FBgn0038144 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_008766769.1 Gene:Tmprss2 / 156435 RGDID:620766 Length:580 Species:Rattus norvegicus


Alignment Length:334 Identity:83/334 - (24%)
Similarity:145/334 - (43%) Gaps:54/334 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VPYSNGAG--CQFDTECVNLDKCPRTRAVMNSSRKNIIGLR--RCGTNKVCCPKWETYLPHDTCG 78
            :|..:||.  .:.:....|:|...:.....:.|.:.::.||  .||...|               
  Rat   199 IPDQSGATSFMKLNVSAGNVDLYKKLYHSDSCSSRMVVSLRCIECGVRSV--------------- 248

  Fly    79 QSRRKPTKGKIPALNEFPWMAMLLYGNKNNLSQKLVPKCGGSLINNWYVLTAAHCVEYPFMDYPY 143
            :.:.:...|...:..::||..        :|..:.:..||||:|...:::|||||||.|      
  Rat   249 RRQSRIVGGSTASPGDWPWQV--------SLHVQGIHVCGGSIITPEWIVTAAHCVEEP------ 299

  Fly   144 ALKTVRLGEHNTSTNPDRAIVNGRRQYAPLYMEIEVDQIITHEQFNRGRRLINDIALVRLKFPVR 208
             |.:.|.............:..|.|.        :|:::|:|..:: .:...|||||::|:.|:.
  Rat   300 -LSSPRYWTAFAGILKQSLMFYGSRH--------QVEKVISHPNYD-SKTKNNDIALMKLQTPLA 354

  Fly   209 YTRAIQPICLPRAQKLAAHKRKFQASGW-PDMGQGIASEVLLRSFIAERHPDVCKSNYDFN---L 269
            :...::|:|||....:....::...||| ....:|..|:||..:.:....|..|.|.|.:|   .
  Rat   355 FNDVVKPVCLPNPGMMLDLAQECWISGWGATYEKGKTSDVLNAAMVPLIEPSKCNSKYIYNNLIT 419

  Fly   270 GSQICAGGLDGN-DTSPGDSGGPLMETVIRGKVTLTYAAGIISYGQKPCVLKTCKPAFYTKTSYF 333
            .:.||||.|.|: |:..|||||||:..    |..:.:..|..|:| ..|. |..:|..|...:.|
  Rat   420 PAMICAGFLQGSVDSCQGDSGGPLVTL----KNEIWWLIGDTSWG-SGCA-KAYRPGVYGNVTVF 478

  Fly   334 FEWIKSKLQ 342
            .:||..:::
  Rat   479 TDWIYQQMR 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8870NP_731802.1 Tryp_SPc 93..340 CDD:238113 71/251 (28%)
Tmprss2XP_008766769.1 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747 10/47 (21%)
Tryp_SPc 254..485 CDD:238113 72/260 (28%)
Blue background indicates that the domain is not in the aligned region.

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