DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip3 and Lipf

DIOPT Version :9

Sequence 1:NP_477331.1 Gene:Lip3 / 41643 FlyBaseID:FBgn0023495 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_059037.1 Gene:Lipf / 50682 RGDID:708441 Length:395 Species:Rattus norvegicus


Alignment Length:363 Identity:138/363 - (38%)
Similarity:210/363 - (57%) Gaps:20/363 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GYPMERHEVVTSDNYILTMHRIPYSPKTGES-SNRPVAFLMHGMLSSSSDWVLMGPERSLAYMLA 99
            |||.:.:||||.|.|||.::|||:.....|: ..|||.:|.||:::|:::|:...|..|||:|||
  Rat    42 GYPCQEYEVVTEDGYILGVYRIPHGKNNSENIGKRPVVYLQHGLIASATNWIANLPNNSLAFMLA 106

  Fly   100 DAGYDVWMGNARGNTYSKAHKYWPTYWQIFWNFSWNEIGMYDVPAMIDYVLAKTGQQQVQYVGHS 164
            |||||||:||:||||:|:.:.|:......||.||::|:..||:||.|::::.||||:::.|||||
  Rat   107 DAGYDVWLGNSRGNTWSRKNVYYSPDSVEFWAFSFDEMAKYDLPATINFIVQKTGQEKIHYVGHS 171

  Fly   165 QGTTVYLVMVSERPEYNDKIKSAHLLGPAAYMGNMKSPLTR-AFAPILGQPNAIVEVCGSMEFMP 228
            ||||:..:..|..|....|||:.:.|.|.|.:...:|||.: :|.|..    ....:.|...|:|
  Rat   172 QGTTIGFIAFSTNPTLAKKIKTFYALAPVATVKYTQSPLKKISFIPTF----LFKLMFGKKMFLP 232

  Fly   229 SNKFKQDLGIEMCQATSPYAD-MCANEIFLIGGYDTEQLDYELLEHIKATSPAGASVNQNLHFCQ 292
            ...|...||.|:|  :....| :|:|.:|:..|:|.:.|:....:.....:|||.||...||:.|
  Rat   233 HTYFDDFLGTEVC--SREVLDLLCSNTLFIFCGFDKKNLNVSRFDVYLGHNPAGTSVQDFLHWAQ 295

  Fly   293 EYNSGKFRKFDY-TALRNPYEYGSYFPPDYKLKNAKAPVLLYYGANDWMCDVSDVRKLRDELPNM 356
            ...||||:.|:: :..:|...|....||:|.:.....||.::.|.||.:.|..||..|..:|.|:
  Rat   296 LVRSGKFQAFNWGSPSQNMLHYNQKTPPEYDVSAMTVPVAVWNGGNDILADPQDVAMLLPKLSNL 360

  Fly   357 ALDYLVPFEK----WAHLDFIWGTEARKYVYDEVLKQM 390
            .      |.|    :.||||||..:|.:.||:|::..|
  Rat   361 L------FHKEILAYNHLDFIWAMDAPQEVYNEMISMM 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip3NP_477331.1 PLN02872 26..392 CDD:215470 138/363 (38%)
Abhydro_lipase 30..89 CDD:282003 23/53 (43%)
Abhydrolase_5 74..>192 CDD:289465 56/117 (48%)
Abhydrolase_5 <315..355 CDD:289465 13/39 (33%)
LipfNP_059037.1 PLN02872 4..389 CDD:215470 137/358 (38%)
Abhydro_lipase 34..96 CDD:282003 23/53 (43%)
Abhydrolase_5 77..>221 CDD:289465 65/147 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335428
Domainoid 1 1.000 229 1.000 Domainoid score I2382
eggNOG 1 0.900 - - E2759_KOG2624
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 272 1.000 Inparanoid score I2916
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 1 1.000 - - mtm8975
orthoMCL 1 0.900 - - OOG6_100408
Panther 1 1.100 - - O PTHR11005
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X80
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

Return to query results.
Submit another query.