DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip3 and lipf

DIOPT Version :9

Sequence 1:NP_477331.1 Gene:Lip3 / 41643 FlyBaseID:FBgn0023495 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_998569.1 Gene:lipf / 406713 ZFINID:ZDB-GENE-040426-2737 Length:396 Species:Danio rerio


Alignment Length:397 Identity:140/397 - (35%)
Similarity:215/397 - (54%) Gaps:18/397 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LKVTILLVGLGLVLAGSRPISDCG----------ERIEDDGYPMERHEVVTSDNYILTMHRIPYS 60
            |.::::::..|||..|...:...|          |.|...|||.|..||||.|.|||:::|||:.
Zfish     4 LVLSLVILTSGLVQYGQSALDGTGLDPEVNMNISEIIRHWGYPAEEFEVVTEDGYILSINRIPHG 68

  Fly    61 PKTGESSNRPVAFLMHGMLSSSSDWVLMGPERSLAYMLADAGYDVWMGNARGNTYSKAHKYWPTY 125
            .|......:||.||.||:|::.|:||...|..||.::|||||:|||:||:||||:|..|......
Zfish    69 VKNKNEEVKPVVFLQHGLLAAGSNWVTNLPNNSLGFVLADAGFDVWIGNSRGNTWSCKHVSLDPR 133

  Fly   126 WQIFWNFSWNEIGMYDVPAMIDYVLAKTGQQQVQYVGHSQGTTVYLVMVSERPEYNDKIKSAHLL 190
            .:.:|.||.:|:...|:||:|:::...|||:|:.|||||||||:..:..|..||...|||....|
Zfish   134 QKEYWKFSHDEMAKKDLPAVINFITKMTGQEQIFYVGHSQGTTIAFMAFSTMPELASKIKMFFAL 198

  Fly   191 GPAAYMGNMKSPLTRAFAPILGQPNAIV-EVCGSMEFMPSNKFKQDLGIEMCQATSPYADMCANE 254
            .|.|.:|..|||:|:    :...|..:: ::.|..:|.|.|:..:....|.| :..|.:.:|.|.
Zfish   199 APVATVGMTKSPMTK----LSVIPEFLIWDLFGQKDFFPQNELIKFFATEFC-SRKPLSVLCGNV 258

  Fly   255 IFLIGGYDTEQLDYELLEHIKATSPAGASVNQNLHFCQEYNSGKFRKFDYTALRNPYEYGSYFPP 319
            .||:.|:|.:.|:........|..|||.||...:|:.|...|.|...:||....|...|....||
Zfish   259 FFLLCGFDEKNLNMSRTPVYTAHCPAGTSVQNMIHWAQAVKSSKLMAYDYGRAGNMAHYNQSTPP 323

  Fly   320 DYKLKNAKAPVLLYYGANDWMCDVSDVRKLRDELPNMALDYLVPFEKWAHLDFIWGTEARKYVYD 384
            .|.:::...|..::.|..|.:.|..||..|..::|.:.  |....:.|.|||||||.:|.:.:|:
Zfish   324 LYNIQDMMVPTAVWSGGQDTLADPKDVALLLTQIPKLV--YKRDIKHWEHLDFIWGMDAPQEMYE 386

  Fly   385 EVLKQMQ 391
            ::::.|:
Zfish   387 KMIEIMR 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip3NP_477331.1 PLN02872 26..392 CDD:215470 135/377 (36%)
Abhydro_lipase 30..89 CDD:282003 28/58 (48%)
Abhydrolase_5 74..>192 CDD:289465 54/117 (46%)
Abhydrolase_5 <315..355 CDD:289465 10/39 (26%)
lipfNP_998569.1 PLN02872 4..393 CDD:215470 139/395 (35%)
Abhydro_lipase 36..97 CDD:282003 28/60 (47%)
Abhydrolase_5 78..242 CDD:289465 69/167 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574727
Domainoid 1 1.000 205 1.000 Domainoid score I2877
eggNOG 1 0.900 - - E2759_KOG2624
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 265 1.000 Inparanoid score I3034
OMA 1 1.010 - - QHG55134
OrthoDB 1 1.010 - - D408561at33208
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 1 1.000 - - otm26515
orthoMCL 1 0.900 - - OOG6_100408
Panther 1 1.100 - - LDO PTHR11005
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X80
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.810

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