DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip3 and Lip4

DIOPT Version :9

Sequence 1:NP_477331.1 Gene:Lip3 / 41643 FlyBaseID:FBgn0023495 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001260356.1 Gene:Lip4 / 34450 FlyBaseID:FBgn0032264 Length:448 Species:Drosophila melanogaster


Alignment Length:437 Identity:169/437 - (38%)
Similarity:246/437 - (56%) Gaps:53/437 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GALKVTILLVGLGLVLAG-------------------------SRPIS-DCGERIEDD------- 35
            |.:..|::.:.|.|:.:|                         .|.:: |...|:|:|       
  Fly    15 GVVDCTLIALSLCLLQSGIVEGISLSLGDITLFNVNFKTPTFLGRSVAVDSNVRLENDVDPNIQE 79

  Fly    36 -------------GYPMERHEVVTSDNYILTMHRIPYSPKTGESSNRPVAFLMHGMLSSSSDWVL 87
                         |||.|.|.:.|.|.||||:|||.....|      || .|:||:|.||:.||:
  Fly    80 DSHLNTYSLIKKYGYPAENHTLETDDGYILTLHRIARPGAT------PV-LLVHGLLDSSATWVM 137

  Fly    88 MGPERSLAYMLADAGYDVWMGNARGNTYSKAHKYWPTYWQIFWNFSWNEIGMYDVPAMIDYVLAK 152
            |||.:.|.|:|.|.||||||.|.||||||:.|..:.|:...||:|:::|:|.:|:||.:||:|..
  Fly   138 MGPNKGLGYLLYDQGYDVWMANVRGNTYSRKHVKYSTHHAKFWDFTFHEMGKHDIPATMDYILNS 202

  Fly   153 TGQQQVQYVGHSQGTTVYLVMVSERPEYNDKIKSAHLLGPAAYMGNMKSPLTRAFAPILGQPNAI 217
            ||..|:.|:||||||.|:.:|.||:|||.|||.....|.|.|::.:.:||:....|......:.:
  Fly   203 TGVSQLHYIGHSQGTVVFWIMASEKPEYMDKIILMQGLAPVAFLKHCRSPVVNFLAEWHLSVSLV 267

  Fly   218 VEVCGSMEFMPSNKFKQDLGIEMCQATSPYADMCANEIFLIGGYDTEQLDYELLEHIKATSPAGA 282
            :::.|..||:|.|:|.......:|..|:...::|:|.|||..|:|..||:..:|..|...|||||
  Fly   268 LKLIGVHEFLPKNEFISMFNRIICDETTITKEICSNVIFLTTGFDKLQLNETMLPVIVGHSPAGA 332

  Fly   283 SVNQNLHFCQEYNSGKFRKFDYTALRNPYEYGSYFPPDYKLKNAKAPVLLYYGANDWMCDVSDVR 347
            |..|..||.|...||.||::|:..|||.:.||:..||.|.|:|.:|.|.||||.|||:....||.
  Fly   333 STKQMQHFGQLNRSGGFRQYDHGWLRNHWIYGTIDPPSYHLENVRAKVALYYGQNDWLAPPEDVE 397

  Fly   348 KLRDELPNMALDYLVPFEKWAHLDFIWGTEARKYVYDEVLKQMQSYE 394
            .|..:|||:...|||..:::.|||||||.:||:.::|.:|:.|:::|
  Fly   398 MLNRKLPNVVEKYLVDDKEFNHLDFIWGIDARELLWDRMLEIMRNHE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip3NP_477331.1 PLN02872 26..392 CDD:215470 162/386 (42%)
Abhydro_lipase 30..89 CDD:282003 28/78 (36%)
Abhydrolase_5 74..>192 CDD:289465 62/117 (53%)
Abhydrolase_5 <315..355 CDD:289465 18/39 (46%)
Lip4NP_001260356.1 PLN02872 88..446 CDD:215470 159/364 (44%)
Abhydro_lipase 88..139 CDD:282003 25/57 (44%)
Abhydrolase_5 121..>253 CDD:289465 67/132 (51%)
Abhydrolase_5 <368..419 CDD:289465 23/50 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439473
Domainoid 1 1.000 133 1.000 Domainoid score I1290
eggNOG 1 0.900 - - E2759_KOG2624
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 194 1.000 Inparanoid score I1354
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D39202at50557
OrthoFinder 1 1.000 - - FOG0000083
OrthoInspector 1 1.000 - - otm26515
orthoMCL 1 0.900 - - OOG6_100408
Panther 1 1.100 - - P PTHR11005
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1506
SonicParanoid 1 1.000 - - X80
1211.830

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