DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lip3 and Lipa

DIOPT Version :10

Sequence 1:NP_477331.1 Gene:Lip3 / 41643 FlyBaseID:FBgn0023495 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_067435.3 Gene:Lipa / 16889 MGIID:96789 Length:397 Species:Mus musculus


Alignment Length:364 Identity:142/364 - (39%)
Similarity:215/364 - (59%) Gaps:14/364 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GYPMERHEVVTSDNYILTMHRIPYSPKT--GESSNRPVAFLMHGMLSSSSDWVLMGPERSLAYML 98
            |||.|.|.|:|.|.|||::||||...|.  |:.. |||.:|.||:|:.||:||......||.::|
Mouse    43 GYPGEEHSVLTGDGYILSIHRIPRGRKNHFGKGP-RPVVYLQHGLLADSSNWVTNIDNSSLGFLL 106

  Fly    99 ADAGYDVWMGNARGNTYSKAHKYWPTYWQIFWNFSWNEIGMYDVPAMIDYVLAKTGQQQVQYVGH 163
            ||||:||||||:||||:|..||........||.||::|:..||:||.|:|:|.||||:|:.||||
Mouse   107 ADAGFDVWMGNSRGNTWSLKHKTLSVSQDEFWAFSFDEMAKYDLPASINYILNKTGQEQIYYVGH 171

  Fly   164 SQGTTVYLVMVSERPEYNDKIKSAHLLGPAAYMGNMKSPLTRAFAPILGQ-PNAIV-EVCGSMEF 226
            |||.|:..:..|:.||...|||...:|.|...:.....||.:     ||: |:.:: ::.|..:|
Mouse   172 SQGCTIGFIAFSQMPELAKKIKMFLVLAPVLSLNFASGPLLQ-----LGRLPDPLLKDMFGQKQF 231

  Fly   227 MPSNKFKQDLGIEMCQATSPYADMCANEIFLIGGYDTEQLDYELLEHIKATSPAGASVNQNLHFC 291
            :|.:...:.|.|.:|.... ..::|||..||:.|::.:.|:...::......|||.||...||:.
Mouse   232 LPQSAMLKWLSIHVCTHVI-MKELCANVFFLLCGFNEKNLNMSRVDVYTTHCPAGTSVQNMLHWG 295

  Fly   292 QEYNSGKFRKFDY-TALRNPYEYGSYFPPDYKLKNAKAPVLLYYGANDWMCDVSDVRKLRDELPN 355
            |.:...|.:.||: ::.:|.:.|...|||.|.:||.:.|..|:.|..||:.|::|:..|..::|.
Mouse   296 QVFKYRKLQAFDWGSSEKNYFHYNQSFPPSYNIKNMRLPTALWSGGRDWLADINDITILLTQIPK 360

  Fly   356 MALDYLVPFEKWAHLDFIWGTEARKYVYDEVLKQMQSYE 394
            :.....:|  :|.|||||||.:|...:|||::..|:.|:
Mouse   361 LVYHKNIP--EWDHLDFIWGLDAPWKLYDEIISLMKKYQ 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip3NP_477331.1 PLN02872 26..392 CDD:215470 141/360 (39%)
LipaNP_067435.3 PLN02872 6..394 CDD:215470 140/359 (39%)

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