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Protein Alignment poly and elp6
DIOPT Version :9
Sequence 1: | NP_001189215.1 |
Gene: | poly / 41641 |
FlyBaseID: | FBgn0086371 |
Length: | 251 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_595765.1 |
Gene: | elp6 / 2540979 |
PomBaseID: | SPBC3H7.10 |
Length: | 249 |
Species: | Schizosaccharomyces pombe |
Alignment Length: | 145 |
Identity: | 35/145 - (24%) |
Similarity: | 71/145 - (48%) |
Gaps: | 14/145 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 115 IRAQVERNYASRNSYTVLIDNLSILFN---LGASKLQVQQFCQDLAALGKEREKLTVITKLSNSD 176
|:...|.::...|| |::|:::.||.: |.::|:| |.:..|.|...::.|...|....
pombe 111 IQCVEENDFEFENS-TIIIEDIDILQSTHALDSTKIQ-----QAILELRKCFSRVIVNVTLGAPL 169
Fly 177 IYQLT-DNNVAKLGQVRIQVLRLKSGVFREVDGKLLIERVLDE-GNYAC---EETRKEVLYKVND 236
..|.: .:::..:....|....|.||..|.:.|.|.:.|:.:. .:..| |:..||:||:|.:
pombe 170 PQQKSLGSSIGHMATRCISCRPLTSGSARRITGFLRLSRMPNHFRSGICETPEDDDKELLYEVTE 234
Fly 237 RNVKVFAPGEIGVKV 251
...||::.|::.:::
pombe 235 AGAKVYSKGQVTLQL 249
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
poly | NP_001189215.1 |
ELP6 |
26..236 |
CDD:286845 |
32/128 (25%) |
elp6 | NP_595765.1 |
ELP6 |
19..>80 |
CDD:286845 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR16184 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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