DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dic1 and rangrf

DIOPT Version :9

Sequence 1:NP_001287313.1 Gene:Dic1 / 41640 FlyBaseID:FBgn0027610 Length:280 Species:Drosophila melanogaster
Sequence 2:XP_002941865.3 Gene:rangrf / 496602 XenbaseID:XB-GENE-5760490 Length:238 Species:Xenopus tropicalis


Alignment Length:52 Identity:15/52 - (28%)
Similarity:22/52 - (42%) Gaps:8/52 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 WFFGGLASVGAA------MVTHPLDLIKVTLQ--TQQGHLSVAQLIPKLARE 53
            :.|..:||...|      :...||.|.::||.  |....|:..||:.|...|
 Frog   116 YHFEDVASSNDAEGQSEVLSVEPLPLAQLTLTACTNAWVLTGHQLVAKFNEE 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic1NP_001287313.1 Mito_carr 10..92 CDD:278578 15/52 (29%)
PTZ00169 13..273 CDD:240302 14/49 (29%)
Mito_carr 89..184 CDD:278578
Mito_carr 189..278 CDD:278578
rangrfXP_002941865.3 Mog1 58..238 CDD:238137 15/52 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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