DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dic1 and Ucp3

DIOPT Version :9

Sequence 1:NP_001287313.1 Gene:Dic1 / 41640 FlyBaseID:FBgn0027610 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_037299.1 Gene:Ucp3 / 25708 RGDID:3933 Length:308 Species:Rattus norvegicus


Alignment Length:280 Identity:92/280 - (32%)
Similarity:144/280 - (51%) Gaps:19/280 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FFG-GLASVGAAMVTHPLDLIKVTLQTQQGHLSVAQL--------IPKLAREQGVLVFYNGLSAS 66
            |.| |.|:..|.::|.|||..||.||.|..:..|..:        |..:.|.:|....|:||.|.
  Rat    17 FLGAGTAACFADLLTFPLDTAKVRLQIQGENPGVQSVQYRGVLGTILTMVRTEGPRSPYSGLVAG 81

  Fly    67 VLRQLTYSTARFGVYEAGKKYV---NTDSFGGKVALAGASGLVGGIVGT----PADMVNVRMQND 124
            :.||:::::.|.|:|::.|::.   .||.  ..||:...:|...|.:..    |.|:|.||.|..
  Rat    82 LHRQMSFASIRIGLYDSVKQFYTPKGTDH--SSVAIRILAGCTTGAMAVTCAQPTDVVKVRFQAM 144

  Fly   125 VKLPPQQRRNYNNAFDGLVRVYRQEGFKRLFSGATAATARGILMTIGQIAFYDQTKIYLLATPYF 189
            ::|.....|.|....|....:.|:||.:.|:.|......|..::...::..||..|..||.:..|
  Rat   145 IRLGTGGERKYRGTMDAYRTIAREEGVRGLWKGTWPNITRNAIVNCAEMVTYDIIKEKLLDSHLF 209

  Fly   190 QDNLVTHFTASLVAGTIATTLTQPLDVLKTRSMNAKPGEFNG-LWDIVKHTAKLGPLGFFKGYVP 253
            .||...||.::..||..||.:..|:||:|||.|||.||.:.. |..:::..|:.||..|:||::|
  Rat   210 TDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAPPGRYRSPLHCMLRMVAQEGPTAFYKGFMP 274

  Fly   254 AFVRLGPHTIITFVFLEQLR 273
            :|:|||...::.||..|||:
  Rat   275 SFLRLGSWNVMMFVTYEQLK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic1NP_001287313.1 Mito_carr 10..92 CDD:278578 29/92 (32%)
PTZ00169 13..273 CDD:240302 90/276 (33%)
Mito_carr 89..184 CDD:278578 25/98 (26%)
Mito_carr 189..278 CDD:278578 37/86 (43%)
Ucp3NP_037299.1 Mito_carr 10..107 CDD:278578 28/89 (31%)
Solcar 1 11..102 28/84 (33%)
PTZ00169 13..298 CDD:240302 92/280 (33%)
Mito_carr 109..206 CDD:278578 26/98 (27%)
Solcar 2 111..202 23/90 (26%)
Mito_carr 209..299 CDD:278578 37/86 (43%)
Solcar 3 211..296 36/84 (43%)
Purine nucleotide binding. /evidence=ECO:0000250 275..297 9/20 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D984118at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.