DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dic1 and Slc25a10

DIOPT Version :10

Sequence 1:NP_650279.1 Gene:Dic1 / 41640 FlyBaseID:FBgn0027610 Length:280 Species:Drosophila melanogaster
Sequence 2:NP_596909.1 Gene:Slc25a10 / 170943 RGDID:621430 Length:286 Species:Rattus norvegicus


Alignment Length:280 Identity:165/280 - (58%)
Similarity:201/280 - (71%) Gaps:7/280 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QERKSMWFFGGLASVGAAMVTHPLDLIKVTLQTQQG-HLSVAQLIPKLAREQGVLVFYNGLSASV 67
            :.|.|.|:||||||.|||..||||||:||.|||||. .|.:..:..::.|..|.|..|||||||:
  Rat     3 EARTSRWYFGGLASCGAACCTHPLDLLKVHLQTQQEVKLRMTGMALQVVRTDGFLALYNGLSASL 67

  Fly    68 LRQLTYSTARFGVYEAGKKYVNTDS-----FGGKVALAGASGLVGGIVGTPADMVNVRMQNDVKL 127
            .||:|||..||.:||..:.|:..||     |..||.|.|.|||.||.||||||:||||||||:||
  Rat    68 CRQMTYSLTRFAIYETMRDYMTKDSQGPLPFYSKVLLGGISGLTGGFVGTPADLVNVRMQNDMKL 132

  Fly   128 PPQQRRNYNNAFDGLVRVYRQEGFKRLFSGATAATARGILMTIGQIAFYDQTKIYLLATPYFQDN 192
            |..|||||::|.|||.||.|:||.|:||||||.|::||.|:|:||::.|||.|..:|:|.|..||
  Rat   133 PLSQRRNYSHALDGLYRVAREEGLKKLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDN 197

  Fly   193 LVTHFTASLVAGTIATTLTQPLDVLKTRSMNAKPGEFNGLWDIVKHTAKLGPLGFFKGYVPAFVR 257
            :.|||.:|.:||..||.|.|||||||||.||:| ||:.|::.....||||||..||||.|||.||
  Rat   198 IFTHFLSSFIAGGCATFLCQPLDVLKTRLMNSK-GEYQGVFHCAVETAKLGPQAFFKGLVPAGVR 261

  Fly   258 LGPHTIITFVFLEQLRLKFG 277
            |.|||::||:||||||..||
  Rat   262 LVPHTVLTFMFLEQLRKHFG 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic1NP_650279.1 Mito_carr 10..92 CDD:395101 44/82 (54%)
Mito_carr 89..184 CDD:395101 61/99 (62%)
Mito_carr 189..278 CDD:395101 55/89 (62%)
Slc25a10NP_596909.1 Solcar 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 7..87 44/79 (56%)
Mito_carr 12..92 CDD:395101 42/79 (53%)
Mito_carr 94..189 CDD:395101 59/94 (63%)
Solcar 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 100..187 58/86 (67%)
Solcar 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00282 196..279 53/83 (64%)
Mito_carr 197..283 CDD:395101 54/86 (63%)

Return to query results.
Submit another query.