DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dic1 and ucp3

DIOPT Version :10

Sequence 1:NP_650279.1 Gene:Dic1 / 41640 FlyBaseID:FBgn0027610 Length:280 Species:Drosophila melanogaster
Sequence 2:XP_002942565.1 Gene:ucp3 / 100495495 XenbaseID:XB-GENE-6464668 Length:309 Species:Xenopus tropicalis


Alignment Length:280 Identity:96/280 - (34%)
Similarity:143/280 - (51%) Gaps:18/280 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FFG-GLASVGAAMVTHPLDLIKVTLQTQQGHLSVAQ-----------LIPKLAREQGVLVFYNGL 63
            |.| |.|:..|.:.|.|||..||.||.|....||..           .|..:.:.:|....||||
 Frog    17 FVGAGTAACIADLFTFPLDTAKVRLQIQGEGTSVKDTKVLRYKGVFGTIKTMVKTEGATSLYNGL 81

  Fly    64 SASVLRQLTYSTARFGVYEAGKKYVNTDSFGGKVA---LAG-ASGLVGGIVGTPADMVNVRMQND 124
            .|.:.||:::::.|.|:|::.|::....|....||   ||| .:|.:...:..|.|:|.||.|..
 Frog    82 VAGLQRQMSFASIRIGLYDSVKQFYCRQSESSGVACRLLAGCTTGAMAVTLAQPTDVVKVRFQAH 146

  Fly   125 VKLPPQQRRNYNNAFDGLVRVYRQEGFKRLFSGATAATARGILMTIGQIAFYDQTKIYLLATPYF 189
            :|:...:|| ||...|....:.::||.:.|:.|..|...|..::...::..||..|..:|.....
 Frog   147 IKVMDGERR-YNGTVDAYKTIAKEEGLRGLWKGTIANITRNAIVNCAELVTYDLIKETILNQRLM 210

  Fly   190 QDNLVTHFTASLVAGTIATTLTQPLDVLKTRSMNAKPGEF-NGLWDIVKHTAKLGPLGFFKGYVP 253
            .|||..||.|:..||..||.:..|:||:|||.||:..|:: |.|........|.|.:.|:||::|
 Frog   211 TDNLPCHFVAAFGAGFCATVVASPVDVVKTRYMNSPAGQYKNALNCAFIMLVKEGSVAFYKGFMP 275

  Fly   254 AFVRLGPHTIITFVFLEQLR 273
            ||:|||...|:.||..|||:
 Frog   276 AFLRLGSWNIVMFVSYEQLK 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dic1NP_650279.1 Mito_carr 10..92 CDD:395101 29/92 (32%)
Mito_carr 89..184 CDD:395101 28/98 (29%)
Mito_carr 189..278 CDD:395101 38/86 (44%)
ucp3XP_002942565.1 PTZ00169 14..299 CDD:240302 96/280 (34%)
Mito_carr 111..206 CDD:395101 27/95 (28%)

Return to query results.
Submit another query.